RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 PSME2Q9UL46 239 aa13.15□□□□□ -0.31
PRPF4-201ENST00000374198 PCDHGC3Q9UN70 934 aa13.15□□□□□ -0.31
PRPF4-201ENST00000374198 TCAF1Q9Y4C2 921 aa13.15□□□□□ -0.31
PRPF4-201ENST00000374198 PSME4Q14997 1843 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 NEMP1O14524 444 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 BMP2P12643 396 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 TGM1P22735 817 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 ADSLP30566 484 aaPredicted RBP13.14□□□□□ -0.31
PRPF4-201ENST00000374198 CNTN2Q02246 1040 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 MERTKQ12866 999 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 LDLRAP1Q5SW96 308 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 C15orf39Q6ZRI6 1047 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 ANKRD13BQ86YJ7 626 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 ZNF516Q92618 1163 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 FEM1CQ96JP0 617 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 SCN4AP35499 1836 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 TCRBV3S1A0A5B6 114 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 RGS13O14921 159 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 GUCY1B2O75343 617 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 KCNH1O95259 989 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 CHRNB1P11230 501 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 MX2P20592 715 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 ENDOUP21128 410 aaKnown RBP13.14□□□□□ -0.31
PRPF4-201ENST00000374198 TRPC1P48995 793 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 FSTL1Q12841 308 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 CUL2Q13617 745 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 INSCQ1MX18 579 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 PGS1Q32NB8 556 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 INAVAQ3KP66 663 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 KCNT2Q6UVM3 1135 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 NPNTQ6UXI9 565 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 ELMOD1Q8N336 334 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 ARFGAP1Q8N6T3 406 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 PACRGLQ8N7B6 248 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 ABHD11Q8NFV4 315 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 ZC3H15Q8WU90 426 aaKnown RBP13.14□□□□□ -0.31
PRPF4-201ENST00000374198 CAPSLQ8WWF8 208 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 NPAS2Q99743 824 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 EBNA1BP2Q99848 306 aaKnown RBP13.14□□□□□ -0.31
PRPF4-201ENST00000374198 ZNF385DQ9H6B1 395 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 GPN2Q9H9Y4 310 aaPredicted RBP13.14□□□□□ -0.31
PRPF4-201ENST00000374198 RBAKQ9NYW8 714 aaPredicted RBP13.14□□□□□ -0.31
PRPF4-201ENST00000374198 TBX20Q9UMR3 447 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 SLC27A5Q9Y2P5 690 aa13.14□□□□□ -0.31
PRPF4-201ENST00000374198 A0A1W2PQ67 120 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 PAPSS1O43252 624 aaPredicted RBP13.13□□□□□ -0.31
PRPF4-201ENST00000374198 HLA-DRAP01903 254 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 APRTP07741 180 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 SHMT1P34896 483 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 ETFBP38117 255 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 PSMD8P48556 350 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 TNK2Q07912 1038 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 HADHQ16836 314 aaKnown RBP13.13□□□□□ -0.31
PRPF4-201ENST00000374198 SLC36A3Q495N2 470 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 LMBRD2Q68DH5 695 aaPredicted RBP13.13□□□□□ -0.31
PRPF4-201ENST00000374198 NAPRTQ6XQN6 538 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 PODNQ7Z5L7 613 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 CNTD1Q8N815 330 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 KCTD6Q8NC69 237 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 ANKK1Q8NFD2 765 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 DCAF4Q8WV16 495 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 LPGAT1Q92604 370 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 BHMTQ93088 406 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 SIGLEC10Q96LC7 697 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 PPP1R36Q96LQ0 422 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 TCF12Q99081 682 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 SH3GL1Q99961 368 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 ZNF577Q9BSK1 485 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 COA1Q9GZY4 146 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 HMG20AQ9NP66 347 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 MRPL40Q9NQ50 206 aaKnown RBP13.13□□□□□ -0.31
PRPF4-201ENST00000374198 PCDHA11Q9Y5I1 949 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 TCAF2A6NFQ2 919 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 PIK3R2O00459 728 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 CLOCKO15516 846 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 LRCH4O75427 683 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 TIPRLO75663 272 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 CPNE6O95741 557 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 ENO2P09104 434 aaPredicted RBP13.13□□□□□ -0.31
PRPF4-201ENST00000374198 PSMA2P25787 234 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 SLFN13Q68D06 897 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 CAMK1DQ8IU85 385 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 MPP5Q8N3R9 675 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 CBR4Q8N4T8 237 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 Q8N9G6 341 aaPredicted RBP13.13□□□□□ -0.31
PRPF4-201ENST00000374198 ZNF606Q8WXB4 792 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 ADAMTS10Q9H324 1103 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 RAD21L1Q9H4I0 556 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 RMND5AQ9H871 391 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 MOV10Q9HCE1 1003 aaKnown RBP13.13□□□□□ -0.31
PRPF4-201ENST00000374198 ZBTB26Q9HCK0 441 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 XPNPEP3Q9NQH7 507 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 MOCS1Q9NZB8 636 aa13.13□□□□□ -0.31
PRPF4-201ENST00000374198 SPDYE2BA6NHP3 402 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 SAC3D1A6NKF1 404 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 A6NL46 340 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 SPDYE6P0CI01 402 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 RARRES1P49788 294 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 PSME3P61289 254 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 TRAP1Q12931 704 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms