RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 ADAMTS19Q8TE59 1207 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 SMYD2Q9NRG4 433 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 UXTQ9UBK9 157 aaPredicted RBP14.07□□□□□ -0.16
PTPRF-202ENST00000372405 IRAK3Q9Y616 596 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 MAD1L1Q9Y6D9 718 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 MYLKQ15746 1914 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 LINC01553A4QN01 128 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 C2orf71A6NGG8 1288 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 SDR42E2A6NKP2 422 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 CXorf49A8MYA2 514 aaPredicted RBP14.07□□□□□ -0.16
PTPRF-202ENST00000372405 F5H5T6 163 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 TRDMT1O14717 391 aaKnown RBP14.07□□□□□ -0.16
PTPRF-202ENST00000372405 GREM1O60565 184 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 OLFM2O95897 454 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 IRF1P10914 325 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 PRKCHP24723 683 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 MTA1Q13330 715 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 MPP2Q14168 576 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 KLHL38Q2WGJ6 581 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 TIGD7Q6NT04 549 aaPredicted RBP14.07□□□□□ -0.16
PTPRF-202ENST00000372405 TRABD2AQ86V40 505 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 SRRM1Q8IYB3 904 aaKnown RBP14.07□□□□□ -0.16
PTPRF-202ENST00000372405 HS6ST3Q8IZP7 471 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 SPPL3Q8TCT6 385 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 MZB1Q8WU39 189 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 AZIN2Q96A70 460 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 STAMBPL1Q96FJ0 436 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 CYTH2Q99418 400 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 SELENOSQ9BQE4 189 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 C17orf80Q9BSJ5 609 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 PPCSQ9HAB8 311 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 KIF9Q9HAQ2 790 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 GLOD4Q9HC38 313 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 CASS4Q9NQ75 786 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 SYBUQ9NX95 663 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 SMPD4Q9NXE4 827 aa14.07□□□□□ -0.16
PTPRF-202ENST00000372405 PSMC3IPQ9P2W1 217 aaPredicted RBP14.07□□□□□ -0.16
PTPRF-202ENST00000372405 AGO1Q9UL18 857 aaKnown RBP14.07□□□□□ -0.16
PTPRF-202ENST00000372405 ERI2A8K979 691 aaKnown RBP14.06□□□□□ -0.16
PTPRF-202ENST00000372405 MT-CYBP00156 380 aaPredicted RBP14.06□□□□□ -0.16
PTPRF-202ENST00000372405 ADH1AP07327 375 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 C8AP07357 584 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 MYOGP15173 224 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 CHN1P15882 459 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 ATP5DP30049 168 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 OR1E1P30953 314 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 LSP1P33241 339 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 ACVRL1P37023 503 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 MAPKAPK2P49137 400 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 SLC11A2P49281 568 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 RPS24P62847 133 aaKnown RBP14.06□□□□□ -0.16
PTPRF-202ENST00000372405 PLPP4Q5VZY2 271 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 STEAP4Q687X5 459 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 TAOK1Q7L7X3 1001 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 ITIH5Q86UX2 942 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 UNC5BQ8IZJ1 945 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 KREMEN2Q8NCW0 462 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 FATE1Q969F0 183 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 FCRL5Q96RD9 977 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 APOL2Q9BQE5 337 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 CNOT10Q9H9A5 744 aaKnown RBP14.06□□□□□ -0.16
PTPRF-202ENST00000372405 TRPC7Q9HCX4 862 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 RBM22Q9NW64 420 aaKnown RBP eCLIP14.06□□□□□ -0.16
PTPRF-202ENST00000372405 LZTS1Q9Y250 596 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 PCDHA11Q9Y5I1 949 aa14.06□□□□□ -0.16
PTPRF-202ENST00000372405 ZFP37Q9Y6Q3 630 aaPredicted RBP14.06□□□□□ -0.16
PTPRF-202ENST00000372405 RAMP2O60895 175 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 NUMBP49757 651 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 SLC10A7Q0GE19 358 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 SERINC3Q13530 473 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 CAMK1Q14012 370 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 POLD3Q15054 466 aaPredicted RBP14.05□□□□□ -0.16
PTPRF-202ENST00000372405 ARL14EPQ8N8R7 260 aaPredicted RBP14.05□□□□□ -0.16
PTPRF-202ENST00000372405 MRPL43Q8N983 215 aaKnown RBP14.05□□□□□ -0.16
PTPRF-202ENST00000372405 GSDMBQ8TAX9 411 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 SLC22A17Q8WUG5 538 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 POF1BQ8WVV4 589 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 SLC44A1Q8WWI5 657 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 ATXN2LQ8WWM7 1075 aaKnown RBP14.05□□□□□ -0.16
PTPRF-202ENST00000372405 ENTPD7Q9NQZ7 604 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 DONSONQ9NYP3 566 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 MOCS1Q9NZB8 636 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 ASB3Q9Y575 518 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.05□□□□□ -0.16
PTPRF-202ENST00000372405 A0A0D9SEW6 157 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 A0A1W2PPM1 405 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 TMEM120BA0PK00 339 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 SCAMP3O14828 347 aaKnown RBP14.05□□□□□ -0.16
PTPRF-202ENST00000372405 FAM155BO75949 473 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 GSTA2P09210 222 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 MBL2P11226 248 aaPredicted RBP14.05□□□□□ -0.16
PTPRF-202ENST00000372405 GABRR2P28476 465 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 STX2P32856 288 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 IFNAR2P48551 515 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 CYP4F8P98187 520 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 HNRNPDQ14103 355 aaKnown RBP14.05□□□□□ -0.16
PTPRF-202ENST00000372405 IHHQ14623 411 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 PARP15Q460N3 678 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 ADGRF1Q5T601 910 aa14.05□□□□□ -0.16
PTPRF-202ENST00000372405 FAM109BQ6ICB4 259 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms