RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 ARHGEF26Q96DR7 871 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 TSEN34Q9BSV6 310 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 ZCWPW1Q9H0M4 648 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 DSN1Q9H410 356 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 RAPGEFL1Q9UHV5 662 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 EIF3LQ9Y262 564 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 SLC30A1Q9Y6M5 507 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 G3V2T6 193 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 H3BMM5 538 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 M0QYT0 321 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 GIT2Q14161 759 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 SPRYD7Q5W111 196 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 CAMKK1Q8N5S9 505 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 MEIOBQ8N635 442 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 TMEM117Q9H0C3 514 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 INTS10Q9NVR2 710 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 DDIT4Q9NX09 232 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 DDX43Q9NXZ2 648 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 VDRP11473 427 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 ITIH1P19827 911 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 GALK1P51570 392 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 ITGA8P53708 1063 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 MRPS6P82932 125 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 PSMD5Q16401 504 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 RBM44Q6ZP01 1051 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 EXOC3L1Q86VI1 746 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 AP3S1Q92572 193 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 MKL1Q969V6 931 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 PPP1R2P1Q96PQ5 205 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 GSAPA4D1B5 854 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 KHDRBS3O75525 346 aaKnown RBP14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 H2AFXP16104 143 aaPredicted RBP14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 RXRGP48443 463 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 CENPCQ03188 943 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 EFEMP1Q12805 493 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 TRAPPC11Q7Z392 1133 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 KCNK18Q7Z418 384 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 ZNF605Q86T29 641 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 FIBCD1Q8N539 461 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 CDK5RAP1Q96SZ6 601 aaKnown RBP14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 PFDN5Q99471 154 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 BTBD10Q9BSF8 475 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 SHCBP1LQ9BZQ2 653 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 CHST12Q9NRB3 414 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 HEATR9A2RTY3 570 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 ABLIM1O14639 778 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 TRIM3O75382 744 aaPredicted RBP14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 ENO2P09104 434 aaPredicted RBP14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 FAM110CQ1W6H9 321 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 C4orf46Q504U0 113 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 TRPV1Q8NER1 839 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 CASKIN2Q8WXE0 1202 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 SLC5A5Q92911 643 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 ZNF558Q96NG5 402 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 C1QTNF1Q9BXJ1 281 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 ATXN3LQ9H3M9 355 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 CAB39LQ9H9S4 337 aa14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 TLR8Q9NR97 1041 aaKnown RBP14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 TRMT13Q9NUP7 481 aaKnown RBP14.27□□□□□ -0.12
RAPGEF1-202ENST00000372190 MAGEA6P43360 314 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 YWHAZP63104 245 aaKnown RBP14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 DEFA5Q01523 94 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 SPIDRQ14159 915 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 WDR93Q6P2C0 686 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 PRCCQ92733 491 aaPredicted RBP14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 KIAA1257Q9ULG3 409 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 POFUT2Q9Y2G5 429 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 PTGES3LE9PB15 166 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 GUCA1AP43080 201 aaPredicted RBP14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 PYHIN1Q6K0P9 492 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 FRMD7Q6ZUT3 714 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 OR6Y1Q8NGX8 325 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 PHACTR1Q9C0D0 580 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 MRPL17Q9NRX2 175 aaKnown RBP14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 CLIC5Q9NZA1 410 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 VPS4AQ9UN37 437 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 TIMM13Q9Y5L4 95 aaPredicted RBP14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 PPP1R3GB7ZBB8 358 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 WWP2O00308 870 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 ZNF432O94892 652 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 NFYCQ13952 458 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 RASA2Q15283 850 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 ZRANB3Q5FWF4 1079 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 ART5Q96L15 291 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 KCTD14Q9BQ13 255 aaPredicted RBP14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 ARHGEF38Q9NXL2 777 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 SLC9A8Q9Y2E8 581 aa14.27□□□□□ -0.13
RAPGEF1-202ENST00000372190 LOC100506127A0A0U1RQW1 187 aa14.26□□□□□ -0.13
RAPGEF1-202ENST00000372190 SLC12A8A0AV02 714 aa14.26□□□□□ -0.13
RAPGEF1-202ENST00000372190 FAM86B1E9PN63 330 aa14.26□□□□□ -0.13
RAPGEF1-202ENST00000372190 H7C2Y5 167 aa14.26□□□□□ -0.13
RAPGEF1-202ENST00000372190 USP2O75604 605 aaPredicted RBP14.26□□□□□ -0.13
RAPGEF1-202ENST00000372190 GSTM1P09488 218 aa14.26□□□□□ -0.13
RAPGEF1-202ENST00000372190 FAM86B2P0C5J1 330 aa14.26□□□□□ -0.13
RAPGEF1-202ENST00000372190 BCAT1P54687 386 aa14.26□□□□□ -0.13
RAPGEF1-202ENST00000372190 ITGA9Q13797 1035 aa14.26□□□□□ -0.13
RAPGEF1-202ENST00000372190 ACAP1Q15027 740 aa14.26□□□□□ -0.13
RAPGEF1-202ENST00000372190 CACHD1Q5VU97 1274 aa14.26□□□□□ -0.13
RAPGEF1-202ENST00000372190 OR8H3Q8N146 312 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms