RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 CMTM8Q8IZV2 173 aa19.86■□□□□ 0.77
CHTOP-204ENST00000368694 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.86■□□□□ 0.77
CHTOP-204ENST00000368694 TEKT5Q96M29 485 aa19.86■□□□□ 0.77
CHTOP-204ENST00000368694 FRMD8Q9BZ67 464 aaPredicted RBP19.86■□□□□ 0.77
CHTOP-204ENST00000368694 PHACTR1Q9C0D0 580 aa19.86■□□□□ 0.77
CHTOP-204ENST00000368694 RETREG1Q9H6L5 497 aa19.86■□□□□ 0.77
CHTOP-204ENST00000368694 NFS1Q9Y697 457 aa19.86■□□□□ 0.77
CHTOP-204ENST00000368694 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.85■□□□□ 0.77
CHTOP-204ENST00000368694 J3KR12 359 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 RFXAPO00287 272 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 LEFTY2O00292 366 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 OPA1O60313 960 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 MOSPD3O75425 235 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 SHBGP04278 402 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 NUDT17P0C025 328 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 NFKB1P19838 968 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 ACVRL1P37023 503 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 SARNPP82979 210 aaKnown RBP19.85■□□□□ 0.77
CHTOP-204ENST00000368694 ZNF177Q13360 481 aaPredicted RBP19.85■□□□□ 0.77
CHTOP-204ENST00000368694 TDHQ8IZJ6 230 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 C12orf76Q8N812 135 aaPredicted RBP19.85■□□□□ 0.77
CHTOP-204ENST00000368694 ZNF707Q96C28 371 aaPredicted RBP19.85■□□□□ 0.77
CHTOP-204ENST00000368694 PABPC5Q96DU9 382 aaKnown RBP19.85■□□□□ 0.77
CHTOP-204ENST00000368694 TASP1Q9H6P5 420 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 ZNF510Q9Y2H8 683 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.85■□□□□ 0.77
CHTOP-204ENST00000368694 GOLGA6L10A6NI86 522 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 EIF3HO15372 352 aaKnown RBP eCLIP19.85■□□□□ 0.778e-7■■■■■ 40.7
CHTOP-204ENST00000368694 TBL1XO60907 577 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 AVILO75366 819 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 CD68P34810 354 aaPredicted RBP19.85■□□□□ 0.77
CHTOP-204ENST00000368694 EIF3BP55884 814 aaKnown RBP19.85■□□□□ 0.77
CHTOP-204ENST00000368694 SERINC3Q13530 473 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 C6orf118Q5T5N4 469 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 CHST9Q7L1S5 443 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 MCUQ8NE86 351 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 ZSCAN18Q8TBC5 510 aaPredicted RBP19.85■□□□□ 0.77
CHTOP-204ENST00000368694 PYROXD1Q8WU10 500 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 NSMCE1Q8WV22 266 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 SMG7Q92540 1137 aaKnown RBP19.85■□□□□ 0.77
CHTOP-204ENST00000368694 TTC25Q96NG3 672 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 ARHGAP26Q9UNA1 814 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 CCL26Q9Y258 94 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 CHD5Q8TDI0 1954 aa19.85■□□□□ 0.77
CHTOP-204ENST00000368694 ALOX15BO15296 676 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 SYF2O95926 243 aaKnown RBP19.84■□□□□ 0.77
CHTOP-204ENST00000368694 RHOCP08134 193 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 CDK16Q00536 496 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 ZNF844Q08AG5 666 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 IL31Q6EBC2 164 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 TMC5Q6UXY8 1006 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 CAPN12Q6ZSI9 719 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 HTR3DQ70Z44 454 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 BBS7Q8IWZ6 715 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 CNTD1Q8N815 330 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 HJURPQ8NCD3 748 aaPredicted RBP19.84■□□□□ 0.77
CHTOP-204ENST00000368694 SH3RF2Q8TEC5 729 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 ING5Q8WYH8 240 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 BHMTQ93088 406 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 TIFAQ96CG3 184 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 IL12RB2Q99665 862 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 IGFLR1Q9H665 355 aa19.84■□□□□ 0.77
CHTOP-204ENST00000368694 EIF2B3Q9NR50 452 aaKnown RBP19.84■□□□□ 0.77
CHTOP-204ENST00000368694 RBM22Q9NW64 420 aaKnown RBP eCLIP19.84■□□□□ 0.77
CHTOP-204ENST00000368694 A0A0D9SEW6 157 aa19.83■□□□□ 0.77
CHTOP-204ENST00000368694 E7ESA3 106 aa19.83■□□□□ 0.77
CHTOP-204ENST00000368694 ZNF197O14709 1029 aa19.83■□□□□ 0.77
CHTOP-204ENST00000368694 RENBPP51606 427 aa19.83■□□□□ 0.77
CHTOP-204ENST00000368694 GNA12Q03113 381 aa19.83■□□□□ 0.77
CHTOP-204ENST00000368694 PRSS36Q5K4E3 855 aa19.83■□□□□ 0.77
CHTOP-204ENST00000368694 CAND1Q86VP6 1230 aaKnown RBP19.83■□□□□ 0.77
CHTOP-204ENST00000368694 FBXO36Q8NEA4 188 aa19.83■□□□□ 0.77
CHTOP-204ENST00000368694 ARHGEF2Q92974 986 aaKnown RBP19.83■□□□□ 0.77
CHTOP-204ENST00000368694 PPP2R3CQ969Q6 453 aa19.83■□□□□ 0.77
CHTOP-204ENST00000368694 TMA16Q96EY4 203 aaKnown RBP19.83■□□□□ 0.77
CHTOP-204ENST00000368694 ZNF419Q96HQ0 510 aaPredicted RBP19.83■□□□□ 0.77
CHTOP-204ENST00000368694 MAGEH1Q9H213 219 aa19.83■□□□□ 0.77
CHTOP-204ENST00000368694 CENPHQ9H3R5 247 aa19.83■□□□□ 0.77
CHTOP-204ENST00000368694 CHMP2BQ9UQN3 213 aa19.83■□□□□ 0.77
CHTOP-204ENST00000368694 MYO9BQ13459 2157 aa19.83■□□□□ 0.77
CHTOP-204ENST00000368694 C2orf16Q68DN1 1984 aa19.83■□□□□ 0.76
CHTOP-204ENST00000368694 H0Y626 953 aa19.83■□□□□ 0.76
CHTOP-204ENST00000368694 PRPSAP1Q14558 356 aa19.83■□□□□ 0.76
CHTOP-204ENST00000368694 OTOP3Q7RTS5 596 aa19.83■□□□□ 0.76
CHTOP-204ENST00000368694 CARNMT1Q8N4J0 409 aa19.83■□□□□ 0.76
CHTOP-204ENST00000368694 OR7D4Q8NG98 312 aa19.83■□□□□ 0.76
CHTOP-204ENST00000368694 OR52K2Q8NGK3 314 aa19.83■□□□□ 0.76
CHTOP-204ENST00000368694 MAML1Q92585 1016 aa19.83■□□□□ 0.76
CHTOP-204ENST00000368694 SH3GL2Q99962 352 aa19.83■□□□□ 0.76
CHTOP-204ENST00000368694 VPS37BQ9H9H4 285 aa19.83■□□□□ 0.76
CHTOP-204ENST00000368694 XAB2Q9HCS7 855 aaKnown RBP19.83■□□□□ 0.76
CHTOP-204ENST00000368694 TDP1Q9NUW8 608 aa19.83■□□□□ 0.76
CHTOP-204ENST00000368694 MRPS23Q9Y3D9 190 aaKnown RBP19.83■□□□□ 0.76
CHTOP-204ENST00000368694 HLA-DQB2P05538 268 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 POU2F2P09086 479 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 GRIA1P42261 906 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 IL10RBQ08334 325 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 HNRNPDQ14103 355 aaKnown RBP19.82■□□□□ 0.76
CHTOP-204ENST00000368694 KRT71Q3SY84 523 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 MARC1Q5VT66 337 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms