RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 PLOD1Q02809 727 aaPredicted RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 ABRQ12979 859 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 ETFRF1Q6IPR1 90 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 CROCCP3Q8IVE0 287 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 ZNF34Q8IZ26 560 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 TMEM86AQ8N2M4 240 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 SDR16C5Q8N3Y7 309 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 PIGKQ92643 395 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 TMEM159Q96B96 161 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 MXRA8Q9BRK3 442 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 SPRTNQ9H040 489 aaPredicted RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 NDST4Q9H3R1 872 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 PIH1D3Q9NQM4 214 aaKnown RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 ATP9BO43861 1147 aa8.77□□□□□ -1
SYNE1-206ENST00000367253 GABBR2O75899 941 aa8.77□□□□□ -1
SYNE1-206ENST00000367253 CCNDBP1O95273 360 aa8.77□□□□□ -1
SYNE1-206ENST00000367253 FSHRP23945 695 aa8.77□□□□□ -1
SYNE1-206ENST00000367253 GALK1P51570 392 aa8.77□□□□□ -1
SYNE1-206ENST00000367253 SNRPD1P62314 119 aaKnown RBP8.77□□□□□ -1
SYNE1-206ENST00000367253 PDAP1Q13442 181 aaKnown RBP8.77□□□□□ -1
SYNE1-206ENST00000367253 CLEC16AQ2KHT3 1053 aa8.77□□□□□ -1
SYNE1-206ENST00000367253 MDH1BQ5I0G3 518 aa8.77□□□□□ -1
SYNE1-206ENST00000367253 SLC9A4Q6AI14 798 aa8.77□□□□□ -1
SYNE1-206ENST00000367253 LPCAT2Q7L5N7 544 aa8.77□□□□□ -1
SYNE1-206ENST00000367253 EFL1Q7Z2Z2 1120 aaKnown RBP8.77□□□□□ -1
SYNE1-206ENST00000367253 KIF2BQ8N4N8 673 aa8.77□□□□□ -1
SYNE1-206ENST00000367253 C19orf18Q8NEA5 215 aa8.77□□□□□ -1
SYNE1-206ENST00000367253 BCAS3Q9H6U6 928 aa8.77□□□□□ -1
SYNE1-206ENST00000367253 SP140LQ9H930 580 aa8.77□□□□□ -1
SYNE1-206ENST00000367253 MTMR4Q9NYA4 1195 aa8.77□□□□□ -1
SYNE1-206ENST00000367253 UVRAGQ9P2Y5 699 aa8.77□□□□□ -1
SYNE1-206ENST00000367253 NFASCO94856 1347 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 A0A0B4J269 797 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 BTN3A3O00478 584 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 CASC3O15234 703 aaKnown RBP8.77□□□□□ -1.01
SYNE1-206ENST00000367253 GPC1P35052 558 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 RPL35P42766 123 aaKnown RBP8.77□□□□□ -1.01
SYNE1-206ENST00000367253 MC1RQ01726 317 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 GALNT1Q10472 559 aaPredicted RBP8.77□□□□□ -1.01
SYNE1-206ENST00000367253 GRM4Q14833 912 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 MIIPQ5JXC2 388 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 LRIG3Q6UXM1 1119 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 PACS1Q6VY07 963 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 DGLUCYQ7Z3D6 616 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 KCNK18Q7Z418 384 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 SETD3Q86TU7 594 aaPredicted RBP8.77□□□□□ -1.01
SYNE1-206ENST00000367253 FBXO30Q8TB52 745 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 FOXJ1Q92949 421 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 COPS4Q9BT78 406 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 ELOVL6Q9H5J4 265 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 USP1O94782 785 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 NUDT14O95848 222 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 NUDT7P0C024 238 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 DBTP11182 482 aaKnown RBP8.77□□□□□ -1.01
SYNE1-206ENST00000367253 MLNP12872 115 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 TYK2P29597 1187 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 SERPINA4P29622 427 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 ATP5C1P36542 298 aaKnown RBP8.77□□□□□ -1.01
SYNE1-206ENST00000367253 IRAK1P51617 712 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 EFEMP1Q12805 493 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 DDIASQ8IXT1 998 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 OR8H2Q8N162 312 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 ZNF784Q8NCA9 323 aaPredicted RBP8.77□□□□□ -1.01
SYNE1-206ENST00000367253 DIS3LQ8TF46 1054 aaKnown RBP8.77□□□□□ -1.01
SYNE1-206ENST00000367253 PPP1R36Q96LQ0 422 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 EML4Q9HC35 981 aaKnown RBP8.77□□□□□ -1.01
SYNE1-206ENST00000367253 PFDN2Q9UHV9 154 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 RCOR1Q9UKL0 485 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 MTO1Q9Y2Z2 717 aaKnown RBP8.77□□□□□ -1.01
SYNE1-206ENST00000367253 PER2O15055 1255 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 TEX33O43247 280 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 FSBPO95073 299 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 IGHEP01854 428 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 NCAM1P13591 858 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 CHN1P15882 459 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 BDH1Q02338 343 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 USP17L6PQ6QN14 398 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 PID1Q7Z2X4 250 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 SMYD4Q8IYR2 804 aaPredicted RBP8.77□□□□□ -1.01
SYNE1-206ENST00000367253 FAM13CQ8NE31 585 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 TRABDQ9H4I3 376 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 EHD1Q9H4M9 534 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 GMIPQ9P107 970 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.77□□□□□ -1.01
SYNE1-206ENST00000367253 NUP50Q9UKX7 468 aa8.77□□□□□ -1.01
SYNE1-206ENST00000367253 RGPD8O14715 1765 aaPredicted RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 CAMTA1Q9Y6Y1 1673 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 C1orf232A0A0U1RR37 186 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 LIN7AO14910 233 aaPredicted RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 BIRC5O15392 142 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 NOS1APO75052 506 aaPredicted RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 PSMC3P17980 439 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 ACTR2P61160 394 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 VSNL1P62760 191 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 HTRA4P83105 476 aaPredicted RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 ZRANB3Q5FWF4 1079 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 SLC27A1Q6PCB7 646 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 C14orf80Q86SX3 495 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 CCDC60Q8IWA6 550 aaPredicted RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 DEPDC4Q8N2C3 294 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms