RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 MGAT5BQ3V5L5 792 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 ATP13A4Q4VNC1 1196 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 BOLA3Q53S33 107 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 ODF2Q5BJF6 829 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 TFDP3Q5H9I0 405 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 BEND6Q5SZJ8 279 aaPredicted RBP11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 SDHAF4Q5VUM1 108 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 RABEPKQ7Z6M1 372 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 ADAT2Q7Z6V5 191 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 CCDC50Q8IVM0 306 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 DCP1BQ8IZD4 617 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 SIX6OS1Q8N1H7 587 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 OSCP1Q8WVF1 389 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 TEKT4Q8WW24 435 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 SEC14L1Q92503 715 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 SLCO2A1Q92959 643 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 TBCBQ99426 244 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 ZCWPW1Q9H0M4 648 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 LINC00597Q9H2U6 94 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 TMLHEQ9NVH6 421 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 DUS2Q9NX74 493 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 AMACRQ9UHK6 382 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 APOBEC2Q9Y235 224 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 RAI2Q9Y5P3 530 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 hCG_1818297A0A087WSY0 165 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 TCRBV7S2A1N4TA0A589 114 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 C3orf70A6NLC5 250 aaPredicted RBP11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 ARHGAP33O14559 1287 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 ATXN7O15265 892 aaPredicted RBP11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 PRPSAP2O60256 369 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 GRAP2O75791 330 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 ENDOD1O94919 500 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 KDELR1P24390 212 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 NOS2P35228 1153 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 GJC1P36383 396 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 COILP38432 576 aaPredicted RBP11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 OPRD1P41143 372 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 MATKP42679 507 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 CDKN2BP42772 138 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 PTGIRP43119 386 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 TKTL1P51854 596 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 ZXDBP98169 803 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 DR1Q01658 176 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 GUCY2DQ02846 1103 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 CUL1Q13616 776 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 BYSLQ13895 437 aaKnown RBP11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 CCNG2Q16589 344 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 NFE2Q16621 373 aaPredicted RBP11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 C15orf59Q2T9L4 293 aaPredicted RBP11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 EML3Q32P44 896 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 MAP7D1Q3KQU3 841 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 SLC39A12Q504Y0 691 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 TXNRD3NBQ6F5E7 133 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 DRICH1Q6PGQ1 229 aaPredicted RBP11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 MFSD7Q6UXD7 560 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 STRADAQ7RTN6 431 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 ZNF605Q86T29 641 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 VSIG1Q86XK7 387 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 NAXDQ8IW45 347 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 CLEC4CQ8WTT0 213 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 FAM172AQ8WUF8 416 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 IRGQQ8WZA9 623 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 RAPGEF5Q92565 580 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 FUBP3Q96I24 572 aaKnown RBP eCLIP11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 CFAP57Q96MR6 1250 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 SLC2A13Q96QE2 648 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 CYP2S1Q96SQ9 504 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 DCLK3Q9C098 648 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 RAB17Q9H0T7 212 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 ZWILCHQ9H900 591 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 EPB41L5Q9HCM4 733 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 DMAP1Q9NPF5 467 aaPredicted RBP11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 ZNF446Q9NWS9 450 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 BCCIPQ9P287 314 aaKnown RBP eCLIP11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 RASAL2Q9UJF2 1139 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 WNT6Q9Y6F9 365 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 NUMA1Q14980 2115 aa11.59□□□□□ -0.55
CSNK1E-202ENST00000366216 LRRD1A4D1F6 860 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 ZNF487B1APH4 448 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 MDM4O15151 490 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 TTI1O43156 1089 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 SYPP08247 313 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 HAPLN1P10915 354 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 BDNFP23560 247 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 IFNAR2P48551 515 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 ARSEP51690 589 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 CACNA2D1P54289 1103 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 DRG2P55039 364 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 HDAC4P56524 1084 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 DAOAP59103 153 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 YWHAZP63104 245 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 MRPS25P82663 173 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 SMARCB1Q12824 385 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 NR1H3Q13133 447 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 PDK2Q15119 407 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 ZNF77Q15935 545 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 SLC25A52Q3SY17 297 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 ZFYVE27Q5T4F4 411 aa11.58□□□□□ -0.56
CSNK1E-202ENST00000366216 PM20D1Q6GTS8 502 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms