RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 RINT1Q6NUQ1 792 aa2.58□□□□□ -2
RNU4-42P-201ENST00000364738 SLC30A9Q6PML9 568 aa2.58□□□□□ -2
RNU4-42P-201ENST00000364738 TMEM200AQ86VY9 491 aa2.58□□□□□ -2
RNU4-42P-201ENST00000364738 PALB2Q86YC2 1186 aa2.58□□□□□ -2
RNU4-42P-201ENST00000364738 HORMAD2Q8N7B1 307 aa2.58□□□□□ -2
RNU4-42P-201ENST00000364738 MIGA1Q8NAN2 632 aa2.58□□□□□ -2
RNU4-42P-201ENST00000364738 CLEC4CQ8WTT0 213 aa2.58□□□□□ -2
RNU4-42P-201ENST00000364738 IGSF21Q96ID5 467 aa2.58□□□□□ -2
RNU4-42P-201ENST00000364738 DUX5Q96PT3 197 aa2.58□□□□□ -2
RNU4-42P-201ENST00000364738 HIPK3Q9H422 1215 aa2.58□□□□□ -2
RNU4-42P-201ENST00000364738 DDX31Q9H8H2 851 aaKnown RBP2.58□□□□□ -2
RNU4-42P-201ENST00000364738 TCF7L2Q9NQB0 619 aa2.58□□□□□ -2
RNU4-42P-201ENST00000364738 OCIAD1Q9NX40 245 aa2.58□□□□□ -2
RNU4-42P-201ENST00000364738 NFU1Q9UMS0 254 aa2.58□□□□□ -2
RNU4-42P-201ENST00000364738 PKP3Q9Y446 797 aa2.58□□□□□ -2
RNU4-42P-201ENST00000364738 TCRBV7S3A2A0A539 114 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 SLC38A8A6NNN8 435 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 KRT36O76013 467 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 FGF18O76093 207 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 CGAP01215 116 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 UNGP13051 313 aaPredicted RBP2.57□□□□□ -2
RNU4-42P-201ENST00000364738 THPOP40225 353 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 AMTP48728 403 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 SF3A3Q12874 501 aaKnown RBP eCLIP2.57□□□□□ -2
RNU4-42P-201ENST00000364738 TRAF3Q13114 568 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 KIF19Q2TAC6 998 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 FAM209BQ5JX69 171 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 ZNF569Q5MCW4 686 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 FAM171A1Q5VUB5 890 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 ENDOVQ8N8Q3 282 aaKnown RBP2.57□□□□□ -2
RNU4-42P-201ENST00000364738 CEP76Q8TAP6 659 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 FAM110DQ8TAY7 271 aaPredicted RBP2.57□□□□□ -2
RNU4-42P-201ENST00000364738 IPO4Q8TEX9 1081 aaKnown RBP2.57□□□□□ -2
RNU4-42P-201ENST00000364738 SLC35F5Q8WV83 523 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 BRI3BPQ8WY22 251 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 ZNF333Q96JL9 665 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 NODALQ96S42 347 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 SPRY4Q9C004 299 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 ZDHHC7Q9NXF8 308 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 IL36RNQ9UBH0 155 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 SLC25A13Q9UJS0 675 aa2.57□□□□□ -2
RNU4-42P-201ENST00000364738 SRPRBQ9Y5M8 271 aaKnown RBP2.57□□□□□ -2
RNU4-42P-201ENST00000364738 MBD3L5A6NJ08 208 aaPredicted RBP2.56□□□□□ -2
RNU4-42P-201ENST00000364738 HNRNPDLO14979 420 aaKnown RBP2.56□□□□□ -2
RNU4-42P-201ENST00000364738 PMM2O15305 246 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 TMCC1O94876 653 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 MYZAPP0CAP1 466 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 NPPBP16860 134 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 NAGAP17050 411 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 GNLYP22749 145 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 C21orf33P30042 268 aaPredicted RBP2.56□□□□□ -2
RNU4-42P-201ENST00000364738 HSPA7P48741 367 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 OAZ1P54368 228 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 CDH12P55289 794 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 TUBA1BP68363 451 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 GRSF1Q12849 480 aaKnown RBP eCLIP2.56□□□□□ -2
RNU4-42P-201ENST00000364738 ZRSR1Q15695 479 aaKnown RBP2.56□□□□□ -2
RNU4-42P-201ENST00000364738 MPEG1Q2M385 716 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 C5orf22Q49AR2 442 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 COBLL1Q53SF7 1204 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 ATG9BQ674R7 924 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 NRSN1Q8IZ57 195 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 MUC20Q8N307 709 aaPredicted RBP2.56□□□□□ -2
RNU4-42P-201ENST00000364738 TCP11L2Q8N4U5 519 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 RFLNBQ8N5W9 214 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 GFM1Q96RP9 751 aaKnown RBP2.56□□□□□ -2
RNU4-42P-201ENST00000364738 MECRQ9BV79 373 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 Q9N2J8 555 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 TM7SF3Q9NS93 570 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 RAI2Q9Y5P3 530 aa2.56□□□□□ -2
RNU4-42P-201ENST00000364738 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.55□□□□□ -2
RNU4-42P-201ENST00000364738 AGAP5A6NIR3 686 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 PIP5K1BO14986 540 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 ITM2AO43736 263 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 SERPINI2O75830 405 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 SOX30O94993 753 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 LARGE1O95461 756 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 IGLV2-11P01706 119 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 MYL3P08590 195 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 F7P08709 466 aaPredicted RBP2.55□□□□□ -2
RNU4-42P-201ENST00000364738 DAOP14920 347 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 HOXB9P17482 250 aaPredicted RBP2.55□□□□□ -2
RNU4-42P-201ENST00000364738 RCAN1P53805 252 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 BNC1Q01954 994 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 SAFBQ15424 915 aaKnown RBP eCLIP2.55□□□□□ -2
RNU4-42P-201ENST00000364738 MRGPRG-AS1Q2M3A8 158 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 PLK5Q496M5 336 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 VWA5B1Q5TIE3 1220 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 DSTYKQ6XUX3 929 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 MON1BQ7L1V2 547 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 DPP9Q86TI2 863 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 GATAD2AQ86YP4 633 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 OR2C3Q8N628 320 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 LILRB1Q8NHL6 650 aaPredicted RBP2.55□□□□□ -2
RNU4-42P-201ENST00000364738 HMGB4Q8WW32 186 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 C18orf8Q96DM3 657 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 ADGRG7Q96K78 797 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 PRPF18Q99633 342 aaKnown RBP2.55□□□□□ -2
RNU4-42P-201ENST00000364738 SARGQ9BW04 601 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 HDHD5Q9BXW7 423 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms