RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 SHC2P98077 582 aa2.32□□□□□ -2.04
RNU6-238P-201ENST00000363313 CSHL1Q14406 222 aa2.32□□□□□ -2.04
RNU6-238P-201ENST00000363313 PLA2G4FQ68DD2 849 aa2.32□□□□□ -2.04
RNU6-238P-201ENST00000363313 CXorf57Q6NSI4 855 aaKnown RBP2.32□□□□□ -2.04
RNU6-238P-201ENST00000363313 DARS2Q6PI48 645 aaKnown RBP2.32□□□□□ -2.04
RNU6-238P-201ENST00000363313 MAPK1IP1LQ8NDC0 245 aa2.32□□□□□ -2.04
RNU6-238P-201ENST00000363313 IQCDQ96DY2 449 aa2.32□□□□□ -2.04
RNU6-238P-201ENST00000363313 CA14Q9ULX7 337 aa2.32□□□□□ -2.04
RNU6-238P-201ENST00000363313 IGKV6D-41A0A0C4DH26 115 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 DHHO43323 396 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 ITM2AO43736 263 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 EXTL3O43909 919 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 FGF17O60258 216 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 ZNF500O60304 480 aaPredicted RBP2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 HLA-DQA2P01906 255 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 CRYAAP02489 173 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 CDH12P55289 794 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 ADORA2A-AS1P86434 159 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 RHAGQ02094 409 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 TTF1Q15361 905 aaPredicted RBP2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 NCAPH2Q6IBW4 605 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 RETSATQ6NUM9 610 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 CRTC1Q6UUV9 634 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 PATL1Q86TB9 770 aaKnown RBP2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 CCDC28AQ8IWP9 274 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 IL17RCQ8NAC3 791 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 CCDC150Q8NCX0 1101 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 SPATA20Q8TB22 786 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 ZCRB1Q8TBF4 217 aaKnown RBP2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 GRAMD1AQ96CP6 724 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 SNX27Q96L92 541 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 LRGUKQ96M69 825 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 EIF2AQ9BY44 585 aaKnown RBP2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 MAGEB5Q9BZ81 275 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 EBF2Q9HAK2 575 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 PCDH12Q9NPG4 1184 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 SCRT2Q9NQ03 307 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 CNTN6Q9UQ52 1028 aa2.31□□□□□ -2.04
RNU6-238P-201ENST00000363313 IGHV4OR15-8A0A075B7B6 117 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 A0A1W2PNU3 283 aaPredicted RBP2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 XPNPEP2O43895 674 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 KIF1CO43896 1103 aaKnown RBP2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 GAGE7O76087 117 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 AMBPP02760 352 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 GAGE12FP0CL80 117 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 GAGE12GP0CL81 117 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 GAGE12IP0CL82 117 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 MYL4P12829 197 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 PPP3CCP48454 512 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 MXI1P50539 228 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 HSD17B4P51659 736 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 FAM193AP78312 1265 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 ST3GAL1Q11201 340 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 GAGE1Q13065 139 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 GAGE4Q13068 117 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 MYBPHQ13203 477 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 PKP1Q13835 747 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 P3H1Q32P28 736 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 MSANTD2Q6P1R3 559 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 TPH2Q8IWU9 490 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 LRRC57Q8N9N7 239 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 NEXN-AS1Q8NBZ9 246 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 CMASQ8NFW8 434 aaPredicted RBP2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 SECTM1Q8WVN6 248 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 IP6K1Q92551 441 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 BRINP2Q9C0B6 783 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 ZNF696Q9H7X3 374 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 ZNF334Q9HCZ1 680 aaPredicted RBP2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 RAP2CQ9Y3L5 183 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 PRSS21Q9Y6M0 314 aa2.3□□□□□ -2.04
RNU6-238P-201ENST00000363313 A0A1B0GVM2 712 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 TMEM247A6NEH6 219 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 RNMTO43148 476 aaKnown RBP2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 TIMP3P35625 211 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 THPOP40225 353 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 NR0B1P51843 470 aaKnown RBP2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 OAZ1P54368 228 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 MCL1Q07820 350 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 SYT16Q17RD7 645 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 AAK1Q2M2I8 961 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 MINDY4Q4G0A6 757 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 BEND5Q7L4P6 421 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 CCDC25Q86WR0 208 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 SPAG16Q8N0X2 631 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 ATP11CQ8NB49 1132 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 CEP76Q8TAP6 659 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 GRAPLQ8TC17 118 aaPredicted RBP2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 LRRC8CQ8TDW0 803 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 DCTN5Q9BTE1 182 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 CDH19Q9H159 772 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 HIPK3Q9H422 1215 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 HELLSQ9NRZ9 838 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 SEL1LQ9UBV2 794 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 MALT1Q9UDY8 824 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 ZMYND8Q9ULU4 1186 aaPredicted RBP2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 NFU1Q9UMS0 254 aa2.29□□□□□ -2.04
RNU6-238P-201ENST00000363313 LOC105369274A0A096LPK9 316 aa2.28□□□□□ -2.04
RNU6-238P-201ENST00000363313 LOC102723532A0A0G2JNH3 316 aa2.28□□□□□ -2.04
RNU6-238P-201ENST00000363313 HSPB6O14558 160 aa2.28□□□□□ -2.04
RNU6-238P-201ENST00000363313 ALDH1L1O75891 902 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms