RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 KLHL14Q9P2G3 628 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 APOBEC2Q9Y235 224 aaKnown RBP7.56□□□□□ -1.2
CLCN3-202ENST00000360642 PCDHA11Q9Y5I1 949 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 MCM3APO60318 1980 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 A0A087WZ62 844 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 C2CD4BA6NLJ0 364 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 M0QYV0 167 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 TGM5O43548 720 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 CSDE1O75534 798 aaKnown RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 PFKMP08237 780 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 ALADP13716 330 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 ARF4P18085 180 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 PHBP35232 272 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 SKIV2L2P42285 1042 aaKnown RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 EIF3EP60228 445 aaKnown RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 KCNJ2P63252 427 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 DNAJC3Q13217 504 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 KYAT1Q16773 422 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 PREPLQ4J6C6 727 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 FDX2Q6P4F2 183 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 LCLAT1Q6UWP7 414 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 TBC1D1Q86TI0 1168 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 DDX53Q86TM3 631 aaKnown RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 RFX6Q8HWS3 928 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 C4orf33Q8N1A6 199 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 ATP11CQ8NB49 1132 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 PJA1Q8NG27 643 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 DCPSQ96C86 337 aaKnown RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 HPDLQ96IR7 371 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 HEXIM2Q96MH2 286 aaKnown RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 FDXACB1Q9BRP7 624 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 BARX2Q9UMQ3 279 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 PHTF1Q9UMS5 762 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 PCDHGB3Q9Y5G1 929 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 EVPLQ92817 2033 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 EDF1O60869 148 aaKnown RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 RNF8O76064 485 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 DDNO94850 711 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 LGALS2P05162 132 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 P4HA1P13674 534 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 STIP1P31948 543 aaKnown RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 PPIL2Q13356 520 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 LAPTM5Q13571 262 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 LRRC32Q14392 662 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 EFTUD2Q15029 972 aaKnown RBP eCLIP7.55□□□□□ -1.22e-6■■■■■ 33.5
CLCN3-202ENST00000360642 NXNQ6DKJ4 435 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 TAPT1Q6NXT6 567 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 FAM71DQ8N9W8 422 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 FBXO36Q8NEA4 188 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 UBA3Q8TBC4 463 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 SPATA18Q8TC71 538 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 DCAKDQ8WVC6 231 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 HSPH1Q92598 858 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 CPB2Q96IY4 423 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 ADPGKQ9BRR6 497 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 CNPY3Q9BT09 278 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 NOD2Q9HC29 1040 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 GEMIN8Q9NWZ8 242 aaKnown RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 XPO7Q9UIA9 1087 aaKnown RBP7.55□□□□□ -1.2
CLCN3-202ENST00000360642 ITGA11Q9UKX5 1188 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 KIAA1257Q9ULG3 409 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 C2CD2Q9Y426 696 aa7.55□□□□□ -1.2
CLCN3-202ENST00000360642 IFRD1O00458 451 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-202ENST00000360642 EFCAB14O75071 495 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 ZWINTO95229 277 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 RBP3P10745 1247 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 NAT2P11245 290 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 YBX3P16989 372 aaKnown RBP eCLIP7.54□□□□□ -1.2
CLCN3-202ENST00000360642 KRT4P19013 534 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 GPD1P21695 349 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 IL4RP24394 825 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 NDST1P52848 882 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 MTM1Q13496 603 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 KCNJ11Q14654 390 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 TMEM132DQ14C87 1099 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 NOMO1Q15155 1222 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 KLHL38Q2WGJ6 581 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 RAB6CQ53S08 254 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 FAM102AQ5T9C2 384 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-202ENST00000360642 FAM47EQ6ZV65 393 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 ZBTB34Q8NCN2 500 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 PIWIL1Q96J94 861 aaKnown RBP7.54□□□□□ -1.2
CLCN3-202ENST00000360642 PAFAH2Q99487 392 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 PAIP2Q9BPZ3 127 aaKnown RBP7.54□□□□□ -1.2
CLCN3-202ENST00000360642 RAB6CQ9H0N0 254 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 USP29Q9HBJ7 922 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 GBA2Q9HCG7 927 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-202ENST00000360642 SLCO1B3Q9NPD5 702 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 DMTF1Q9Y222 760 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 INVSQ9Y283 1065 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 SBF1O95248 1867 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 A0A1B0GUA9 196 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 ASB14A6NK59 587 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 IGF2BP3O00425 579 aaKnown RBP eCLIP7.54□□□□□ -1.2
CLCN3-202ENST00000360642 MCF2LO15068 1137 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 UNC5CO95185 931 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 GLB1P16278 677 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 CA4P22748 312 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 MAP4K2Q12851 820 aa7.54□□□□□ -1.2
CLCN3-202ENST00000360642 NPNTQ6UXI9 565 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms