RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 PHOSPHO2Q8TCD6 241 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 AHCYL2Q96HN2 611 aaKnown RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 PRPF18Q99633 342 aaKnown RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 TEX12Q9BXU0 123 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 TTYH3Q9C0H2 523 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 IL22Q9GZX6 179 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 ATP13A1Q9HD20 1204 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 TUBGCP4Q9UGJ1 667 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 PHTF1Q9UMS5 762 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 ANKRD6Q9Y2G4 727 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 CCDC78A2IDD5 438 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 NOL4O94818 638 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 RB1P06400 928 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 ALDH18A1P54886 795 aaKnown RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 JAM2P57087 298 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 CYP4F8P98187 520 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 SPIRE1Q08AE8 756 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 LRRC32Q14392 662 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 CBX2Q14781 532 aaPredicted RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 HIST2H2ACQ16777 129 aaPredicted RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 HABP4Q5JVS0 413 aaKnown RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 VARS2Q5ST30 1063 aaKnown RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 HIST2H2AA3Q6FI13 130 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 GRAMD4Q6IC98 578 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 ANGPTL8Q6UXH0 198 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 SERINC5Q86VE9 423 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 LGI2Q8N0V4 545 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 RASGEF1CQ8N431 466 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 PIP4K2CQ8TBX8 421 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 SEMA4DQ92854 862 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 CHST7Q9NS84 486 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 DNMT3LQ9UJW3 386 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 A0A1W2PRU2 124 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 MAP2K7O14733 419 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 E2F6O75461 281 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 TPBGLP0DKB5 382 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 ATP4AP20648 1035 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 SLC11A1P49279 550 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 NAA20P61599 178 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 DNAAF5Q86Y56 855 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 DENND1CQ8IV53 801 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 ARID3BQ8IVW6 561 aaPredicted RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 CMTR2Q8IYT2 770 aaKnown RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 ALLCQ8N6M5 410 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 PRELID2Q8N945 189 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 ZSWIM2Q8NEG5 633 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 HMGB4Q8WW32 186 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 ATXN2LQ8WWM7 1075 aaKnown RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 IRGQQ8WZA9 623 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 SNRNP25Q9BV90 132 aaKnown RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 POLR1EQ9GZS1 481 aaKnown RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 PDZD7Q9H5P4 517 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 BCAS3Q9H6U6 928 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 NRDE2Q9H7Z3 1164 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 SFXN1Q9H9B4 322 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 IARS2Q9NSE4 1012 aaKnown RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 KLC4Q9NSK0 619 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 NINJ2Q9NZG7 142 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 LAMB1P07942 1786 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 hCG_1818297A0A087WSY0 165 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 RNF103-CHMP3A0A140T963 221 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 RCCD1A6NED2 376 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 ZW10O43264 779 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 MTA2O94776 668 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 MAP3K6O95382 1288 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 CPA3P15088 417 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 GJA1P17302 382 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 CHKAP35790 457 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 SEC24CP53992 1094 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 POLR2LP62875 67 aaKnown RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 IL1RL1Q01638 556 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 MBTD1Q05BQ5 628 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 FAAP100Q0VG06 881 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 CAPRIN1Q14444 709 aaKnown RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 PDE12Q6L8Q7 609 aaKnown RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 LRRC34Q8IZ02 419 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 MYO1HQ8N1T3 1032 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 TNIP2Q8NFZ5 429 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 SLC26A7Q8TE54 656 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 UHRF1Q96T88 793 aaPredicted RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 CASS4Q9NQ75 786 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 UBA2Q9UBT2 640 aaPredicted RBP7.16□□□□□ -1.26
RAB5B-201ENST00000360299 MYH6P13533 1939 aa7.16□□□□□ -1.26
RAB5B-201ENST00000360299 PPFIA2O75334 1257 aa7.15□□□□□ -1.26
RAB5B-201ENST00000360299 DNAJC8O75937 253 aaPredicted RBP7.15□□□□□ -1.26
RAB5B-201ENST00000360299 IL1BP01584 269 aa7.15□□□□□ -1.26
RAB5B-201ENST00000360299 ENO1P06733 434 aaKnown RBP7.15□□□□□ -1.26
RAB5B-201ENST00000360299 RBL1P28749 1068 aa7.15□□□□□ -1.26
RAB5B-201ENST00000360299 SLC25A52Q3SY17 297 aa7.15□□□□□ -1.26
RAB5B-201ENST00000360299 C2orf49Q9BVC5 232 aaPredicted RBP7.15□□□□□ -1.26
RAB5B-201ENST00000360299 FGFBP2Q9BYJ0 223 aa7.15□□□□□ -1.26
RAB5B-201ENST00000360299 OSGEPL1Q9H4B0 414 aa7.15□□□□□ -1.26
RAB5B-201ENST00000360299 ETNK2Q9NVF9 386 aa7.15□□□□□ -1.26
RAB5B-201ENST00000360299 PLK2Q9NYY3 685 aa7.15□□□□□ -1.26
RAB5B-201ENST00000360299 RUVBL2Q9Y230 463 aaKnown RBP7.15□□□□□ -1.26
RAB5B-201ENST00000360299 REXO2Q9Y3B8 237 aaKnown RBP7.15□□□□□ -1.26
RAB5B-201ENST00000360299 GOLGA8TH3BQL2 631 aa7.15□□□□□ -1.26
RAB5B-201ENST00000360299 DHX15O43143 795 aaKnown RBP7.15□□□□□ -1.26
RAB5B-201ENST00000360299 THRAP10827 490 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms