RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 TPST1O60507 370 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 GMFBP60983 142 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 RAB2AP61019 212 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 FBXL19Q6PCT2 694 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 MILR1Q7Z6M3 343 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 FLCNQ8NFG4 579 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 SYTL5Q8TDW5 730 aaPredicted RBP9.83□□□□□ -0.84
CUX1-203ENST00000360264 ASZ1Q8WWH4 475 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 TRAPPC9Q96Q05 1148 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 MRPL17Q9NRX2 175 aaKnown RBP9.83□□□□□ -0.84
CUX1-203ENST00000360264 FKBP1AP62942 108 aaKnown RBP9.83□□□□□ -0.84
CUX1-203ENST00000360264 KLHL23Q8NBE8 558 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 RIT1Q92963 219 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 FAM126AQ9BYI3 521 aaPredicted RBP9.83□□□□□ -0.84
CUX1-203ENST00000360264 LTA4HP09960 611 aaKnown RBP9.83□□□□□ -0.84
CUX1-203ENST00000360264 CHKAP35790 457 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 CDC42P60953 191 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 CBWD6Q4V339 395 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 ELL3Q9HB65 397 aaPredicted RBP9.83□□□□□ -0.84
CUX1-203ENST00000360264 GYS1P13807 737 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 SQLEQ14534 574 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 SORCS3Q9UPU3 1222 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 LSM12Q3MHD2 195 aaKnown RBP9.82□□□□□ -0.84
CUX1-203ENST00000360264 MTDHQ86UE4 582 aaKnown RBP9.82□□□□□ -0.84
CUX1-203ENST00000360264 ZCCHC9Q8N567 271 aaKnown RBP9.82□□□□□ -0.84
CUX1-203ENST00000360264 SLC25A23Q9BV35 468 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 CCDC177Q9NQR7 707 aaPredicted RBP9.82□□□□□ -0.84
CUX1-203ENST00000360264 ANGPT4Q9Y264 503 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 SERPINA4P29622 427 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 FXR1P51114 621 aaKnown RBP eCLIP9.82□□□□□ -0.84
CUX1-203ENST00000360264 OTUD4Q01804 1114 aaKnown RBP9.82□□□□□ -0.84
CUX1-203ENST00000360264 FSCN1Q16658 493 aaKnown RBP9.82□□□□□ -0.84
CUX1-203ENST00000360264 FAM171A1Q5VUB5 890 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 REXO4Q9GZR2 422 aaKnown RBP9.82□□□□□ -0.84
CUX1-203ENST00000360264 NOD2Q9HC29 1040 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 CNOT1A5YKK6 2376 aaKnown RBP9.82□□□□□ -0.84
CUX1-203ENST00000360264 USP27XA6NNY8 438 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 MLYCDO95822 493 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 C21orf59P57076 290 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 RHAGQ02094 409 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 TRPV3Q8NET8 790 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 ITFG1Q8TB96 612 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 TRPS1Q9UHF7 1281 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 MFN2O95140 757 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 SOX11P35716 441 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 GIT2Q14161 759 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 PPP1R15BQ5SWA1 713 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 CYB5D1Q6P9G0 228 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 MFSD7Q6UXD7 560 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 SERPINA13PQ6UXR4 307 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 BRSK2Q8IWQ3 736 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 SHCBP1LQ9BZQ2 653 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 ST3GAL5Q9UNP4 418 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 PCDHA3Q9Y5H8 950 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 TRPV2Q9Y5S1 764 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 CLUHO75153 1309 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 PLIN5Q00G26 463 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 CAMK1Q14012 370 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 TBC1D25Q3MII6 688 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 EPC2Q52LR7 807 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 DEFB107AQ8IZN7 70 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 TSPAN14Q8NG11 270 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 TEFMQ96QE5 360 aaKnown RBP9.82□□□□□ -0.84
CUX1-203ENST00000360264 A1CFQ9NQ94 594 aaKnown RBP9.82□□□□□ -0.84
CUX1-203ENST00000360264 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.82□□□□□ -0.84
CUX1-203ENST00000360264 ZNF624Q9P2J8 865 aaPredicted RBP9.82□□□□□ -0.84
CUX1-203ENST00000360264 GGT7Q9UJ14 662 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 POLEQ07864 2286 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 AP3D1O14617 1153 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 CXCL11O14625 94 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 OR6B1O95007 311 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 RALGDSQ12967 914 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 SLC27A1Q6PCB7 646 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 UNC93AQ86WB7 457 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 DEPDC4Q8N2C3 294 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 EPS8L3Q8TE67 593 aaKnown RBP9.82□□□□□ -0.84
CUX1-203ENST00000360264 TIFAQ96CG3 184 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 UGT2B15P54855 530 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 ZNF720Q7Z2F6 126 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 QKIQ96PU8 341 aaKnown RBP eCLIP9.82□□□□□ -0.846e-15■■■■□ 22.1
CUX1-203ENST00000360264 TMEM120AQ9BXJ8 343 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 KLHL25Q9H0H3 589 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 RPTORQ8N122 1335 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 UBE2QL1A1L167 161 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 SNPHO15079 494 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 PTENP60484 403 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 FGD3Q5JSP0 725 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 METTL6Q8TCB7 284 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 ATXN2LQ8WWM7 1075 aaKnown RBP9.82□□□□□ -0.84
CUX1-203ENST00000360264 NECTIN3Q9NQS3 549 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 RBM22Q9NW64 420 aaKnown RBP eCLIP9.82□□□□□ -0.84
CUX1-203ENST00000360264 MORF4L1Q9UBU8 362 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 SNCAIPQ9Y6H5 919 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 CPS1P31327 1500 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 LRRC7Q96NW7 1537 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 RFTN2Q52LD8 501 aaPredicted RBP9.82□□□□□ -0.84
CUX1-203ENST00000360264 CXorf40BQ96DE9 158 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 ERGIC3Q9Y282 383 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 ZNF609O15014 1411 aa9.82□□□□□ -0.84
CUX1-203ENST00000360264 RGL2O15211 777 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms