RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 POLNQ7Z5Q5 900 aa16.27■□□□□ 0.2
COL18A1-203ENST00000359759 OFCC1Q8IZS5 231 aa16.27■□□□□ 0.2
COL18A1-203ENST00000359759 AGAP11Q8TF27 550 aa16.27■□□□□ 0.2
COL18A1-203ENST00000359759 FDXACB1Q9BRP7 624 aaPredicted RBP16.27■□□□□ 0.2
COL18A1-203ENST00000359759 LRRC4BQ9NT99 713 aa16.27■□□□□ 0.2
COL18A1-203ENST00000359759 OPTCQ9UBM4 332 aa16.27■□□□□ 0.2
COL18A1-203ENST00000359759 SHOC2Q9UQ13 582 aa16.27■□□□□ 0.2
COL18A1-203ENST00000359759 SCGNO76038 276 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 BMP10O95393 424 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 SERPINF2P08697 491 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 CYP4B1P13584 511 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 SGCGQ13326 291 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 CCSAPQ6IQ19 270 aaPredicted RBP16.27■□□□□ 0.19
COL18A1-203ENST00000359759 MTG1Q9BT17 334 aaPredicted RBP16.27■□□□□ 0.19
COL18A1-203ENST00000359759 ATP13A1Q9HD20 1204 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 CLIC5Q9NZA1 410 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 HACL1Q9UJ83 578 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 ENTPD4Q9Y227 616 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 RAMP2O60895 175 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 VPS4BO75351 444 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 SHBGP04278 402 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 RPN2P04844 631 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 ZNF24P17028 368 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 ZNF7P17097 686 aaPredicted RBP16.27■□□□□ 0.19
COL18A1-203ENST00000359759 STAT5AP42229 794 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 HNMTP50135 292 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 BCAP31P51572 246 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 IL2P60568 153 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 PTPAQ15257 358 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 SPATA20Q8TB22 786 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 AHCYL2Q96HN2 611 aaKnown RBP16.27■□□□□ 0.19
COL18A1-203ENST00000359759 MAML3Q96JK9 1138 aa16.27■□□□□ 0.19
COL18A1-203ENST00000359759 BANF1O75531 89 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 LSM8O95777 96 aaKnown RBP16.26■□□□□ 0.19
COL18A1-203ENST00000359759 CALCAP01258 141 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 ERVK-9P63128 1117 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 YME1L1Q96TA2 773 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 SAE1Q9UBE0 346 aaPredicted RBP16.26■□□□□ 0.19
COL18A1-203ENST00000359759 CLEC4AQ9UMR7 237 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 UBE2QL1A1L167 161 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 HMGCRP04035 888 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 ADRA2BP18089 450 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 TOB1P50616 345 aaPredicted RBP16.26■□□□□ 0.19
COL18A1-203ENST00000359759 SPIDRQ14159 915 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 GCNT7Q6ZNI0 430 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 TSEN2Q8NCE0 465 aaKnown RBP16.26■□□□□ 0.19
COL18A1-203ENST00000359759 REPS1Q96D71 796 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 FAM192AQ9GZU8 254 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 HIST1H2ABP04908 130 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 URODP06132 367 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 GZMAP12544 262 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 CDC42P60953 191 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 HIST3H2AQ7L7L0 130 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 LGI2Q8N0V4 545 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 ABRAQ8N0Z2 381 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 APBB2Q92870 758 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 HIST1H2ACQ93077 130 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 OSMRQ99650 979 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 SLC4A5Q9BY07 1137 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 BHLHE41Q9C0J9 482 aaPredicted RBP16.26■□□□□ 0.19
COL18A1-203ENST00000359759 CDH9Q9ULB4 789 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 BTRCQ9Y297 605 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 STX11O75558 287 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 MAGP20916 626 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 PTPN3P26045 913 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 MYBPC1Q00872 1141 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 LAMTOR4Q0VGL1 99 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 DEFB128Q7Z7B8 93 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 HPS1Q92902 700 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 PCDH12Q9NPG4 1184 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 ARL15Q9NXU5 204 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 CRNNQ9UBG3 495 aaPredicted RBP16.26■□□□□ 0.19
COL18A1-203ENST00000359759 SNCAIPQ9Y6H5 919 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 GUCY1B2O75343 617 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 RPL14P50914 215 aaKnown RBP16.26■□□□□ 0.19
COL18A1-203ENST00000359759 HIRAP54198 1017 aaPredicted RBP16.26■□□□□ 0.19
COL18A1-203ENST00000359759 MCOLN3Q8TDD5 553 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 PIGKQ92643 395 aa16.26■□□□□ 0.19
COL18A1-203ENST00000359759 MMADHCQ9H3L0 296 aaPredicted RBP16.26■□□□□ 0.19
COL18A1-203ENST00000359759 WBP11Q9Y2W2 641 aaKnown RBP16.26■□□□□ 0.19
COL18A1-203ENST00000359759 GPC6Q9Y625 555 aaPredicted RBP16.26■□□□□ 0.19
COL18A1-203ENST00000359759 TMCC2O75069 709 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 MADCAM1Q13477 382 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 CRY1Q16526 586 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 TTMPQ5BVD1 217 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 BROXQ5VW32 411 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 SCIMPQ6UWF3 145 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 ARHGAP36Q6ZRI8 547 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 ELOA2Q8IYF1 753 aaPredicted RBP16.25■□□□□ 0.19
COL18A1-203ENST00000359759 FAM151AQ8WW52 585 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 CATSPERZQ9NTU4 200 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 FFAR3O14843 346 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 GPR42O15529 346 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 AP5Z1O43299 807 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 PEX11AO75192 247 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 SASH3O75995 380 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 GMPSP49915 693 aaPredicted RBP16.25■□□□□ 0.19
COL18A1-203ENST00000359759 EPS8Q12929 822 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 RABL6Q3YEC7 729 aaPredicted RBP16.25■□□□□ 0.19
COL18A1-203ENST00000359759 ZNF720Q7Z2F6 126 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms