RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 RHDQ02161 417 aa11.61□□□□□ -0.55
SEPSECS-201ENST00000358971 CCDC14Q49A88 953 aa11.61□□□□□ -0.55
SEPSECS-201ENST00000358971 HMBOX1Q6NT76 420 aa11.61□□□□□ -0.55
SEPSECS-201ENST00000358971 UNC5AQ6ZN44 842 aa11.61□□□□□ -0.55
SEPSECS-201ENST00000358971 FLAD1Q8NFF5 587 aa11.61□□□□□ -0.55
SEPSECS-201ENST00000358971 LILRB1Q8NHL6 650 aaPredicted RBP11.61□□□□□ -0.55
SEPSECS-201ENST00000358971 HDAC11Q96DB2 347 aa11.61□□□□□ -0.55
SEPSECS-201ENST00000358971 C11orf70Q9BRQ4 267 aa11.61□□□□□ -0.55
SEPSECS-201ENST00000358971 LHPPQ9H008 270 aa11.61□□□□□ -0.55
SEPSECS-201ENST00000358971 MUC3BQ9H195 1237 aa11.61□□□□□ -0.55
SEPSECS-201ENST00000358971 PKD2L1Q9P0L9 805 aa11.61□□□□□ -0.55
SEPSECS-201ENST00000358971 IFT80Q9P2H3 777 aaPredicted RBP11.61□□□□□ -0.55
SEPSECS-201ENST00000358971 SFMBT1Q9UHJ3 866 aa11.61□□□□□ -0.55
SEPSECS-201ENST00000358971 CNOT6Q9ULM6 557 aaKnown RBP11.61□□□□□ -0.55
SEPSECS-201ENST00000358971 PCDHGC3Q9UN70 934 aa11.61□□□□□ -0.55
SEPSECS-201ENST00000358971 CENPXA8MT69 81 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 BMP4P12644 408 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 VAMP7P51809 220 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 TNFAIP2Q03169 654 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 C10orf107Q8IVU9 208 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 GALNT12Q8IXK2 581 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 PCDH20Q8N6Y1 951 aaKnown RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 CNDP2Q96KP4 475 aaKnown RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 SORT1Q99523 831 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 NPAS2Q99743 824 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 EPS8L2Q9H6S3 715 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 WDR55Q9H6Y2 383 aaPredicted RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 RPRD1BQ9NQG5 326 aaKnown RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 KIF1AQ12756 1690 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 FRMPD2Q68DX3 1309 aaPredicted RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 ZNF195O14628 629 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 NRP1O14786 923 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 TLR3O15455 904 aaKnown RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 B4GAT1O43505 415 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 SYNCRIPO60506 623 aaKnown RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 TPST1O60507 370 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 B3GALNT1O75752 331 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 IL18RAPO95256 599 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 HSPA4LO95757 839 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 GFAPP14136 432 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 TCF4P15884 667 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 C19orf57Q0VDD7 668 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 AQP6Q13520 282 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 TRIM25Q14258 630 aaKnown RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 POLD3Q15054 466 aaPredicted RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 PPP1R3AQ16821 1122 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 C6orf10Q5SRN2 563 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 SLFN13Q68D06 897 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 NXNQ6DKJ4 435 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 SPOCD1Q6ZMY3 1216 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 IDO2Q6ZQW0 420 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 FAM178BQ8IXR5 827 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 CCDC24Q8N4L8 307 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 TMEM35BQ8NCS4 154 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 OR5H6Q8NGV6 325 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 JPH3Q8WXH2 748 aaPredicted RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 NKD2Q969F2 451 aaPredicted RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 PBXIP1Q96AQ6 731 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 MKRN2Q9H000 416 aaKnown RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 NDFIP2Q9NV92 336 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 EIF3LQ9Y262 564 aaKnown RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 A0A1B0GUL6 1792 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 TNS3Q68CZ2 1445 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 FAM149AA5PLN7 773 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 LRRIQ4A6NIV6 560 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 M0R3G1 203 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 B4GALT4O60513 344 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 GPC4O75487 556 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 GAP43P17677 238 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 GABRB2P47870 512 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 ABCE1P61221 599 aaKnown RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 PSMC5P62195 406 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 EN1Q05925 392 aaPredicted RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 GALNT1Q10472 559 aaPredicted RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 LAMC2Q13753 1193 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 CDK10Q15131 360 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 ZFP69Q49AA0 526 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 FAM205BPQ63HN1 556 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 SDE2Q6IQ49 451 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 LPGAT1Q92604 370 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 ASB9Q96DX5 294 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 MAGED4Q96JG8 741 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 SNX18Q96RF0 628 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 TARS2Q9BW92 718 aaKnown RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 DGCR6LQ9BY27 220 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 ZC3H7BQ9UGR2 993 aaKnown RBP11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 AURKCQ9UQB9 309 aa11.6□□□□□ -0.55
SEPSECS-201ENST00000358971 TRIM64A6NGJ6 449 aa11.59□□□□□ -0.55
SEPSECS-201ENST00000358971 GOLGA8JA6NMD2 632 aa11.59□□□□□ -0.55
SEPSECS-201ENST00000358971 C12orf71A8MTZ7 269 aa11.59□□□□□ -0.55
SEPSECS-201ENST00000358971 ERVH48-1M5A8F1 160 aa11.59□□□□□ -0.55
SEPSECS-201ENST00000358971 EIF3DO15371 548 aaKnown RBP eCLIP11.59□□□□□ -0.55
SEPSECS-201ENST00000358971 SEC14L2O76054 403 aa11.59□□□□□ -0.55
SEPSECS-201ENST00000358971 DBTP11182 482 aaKnown RBP11.59□□□□□ -0.55
SEPSECS-201ENST00000358971 MBL2P11226 248 aaPredicted RBP11.59□□□□□ -0.55
SEPSECS-201ENST00000358971 RALBP11234 206 aa11.59□□□□□ -0.55
SEPSECS-201ENST00000358971 SLC7A1P30825 629 aa11.59□□□□□ -0.55
SEPSECS-201ENST00000358971 RRM2P31350 389 aa11.59□□□□□ -0.55
SEPSECS-201ENST00000358971 SLC9A3P48764 834 aa11.59□□□□□ -0.55
SEPSECS-201ENST00000358971 POU6F2P78424 691 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms