RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 FIGNQ5HY92 759 aa11.17□□□□□ -0.62
FN1-205ENST00000357867 NPAS4Q8IUM7 802 aa11.17□□□□□ -0.62
FN1-205ENST00000357867 TOP6BLQ8N6T0 577 aa11.17□□□□□ -0.62
FN1-205ENST00000357867 ADAM33Q9BZ11 813 aa11.17□□□□□ -0.62
FN1-205ENST00000357867 CNGB3Q9NQW8 809 aa11.17□□□□□ -0.62
FN1-205ENST00000357867 COPG1Q9Y678 874 aaKnown RBP11.17□□□□□ -0.62
FN1-205ENST00000357867 PHRF1Q9P1Y6 1649 aaKnown RBP11.16□□□□□ -0.62
FN1-205ENST00000357867 TMEM120BA0PK00 339 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 ABCB1P08183 1280 aaPredicted RBP11.16□□□□□ -0.62
FN1-205ENST00000357867 TARBP2Q15633 366 aaKnown RBP11.16□□□□□ -0.62
FN1-205ENST00000357867 KYNUQ16719 465 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 ZDHHC20Q5W0Z9 365 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 RBM43Q6ZSC3 357 aaKnown RBP11.16□□□□□ -0.62
FN1-205ENST00000357867 TDRD5Q8NAT2 981 aaKnown RBP11.16□□□□□ -0.62
FN1-205ENST00000357867 FERD3LQ96RJ6 166 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 GSAPA4D1B5 854 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 CYP1A1P04798 512 aaPredicted RBP11.16□□□□□ -0.62
FN1-205ENST00000357867 GLRA2P23416 452 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 RPL3P39023 403 aaKnown RBP11.16□□□□□ -0.62
FN1-205ENST00000357867 CCR4P51679 360 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 NUP107P57740 925 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 TBC1D25Q3MII6 688 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 GPR135Q8IZ08 494 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 OLFM3Q96PB7 478 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 VIPAS39Q9H9C1 493 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 PCDHA2Q9Y5H9 948 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 FER1L6Q2WGJ9 1857 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 ECM29Q5VYK3 1845 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 A0A1W2PQ67 120 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 E9PBE3 544 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 SYN3O14994 580 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 LGR5O75473 907 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 SKAP2O75563 359 aaPredicted RBP11.16□□□□□ -0.62
FN1-205ENST00000357867 SMAD3P84022 425 aaKnown RBP11.16□□□□□ -0.62
FN1-205ENST00000357867 PFKPQ01813 784 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 WLSQ5T9L3 541 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 KLHL23Q8NBE8 558 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 FAIM2Q9BWQ8 316 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 GPATCH2LQ9NWQ4 482 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 ABI3Q9P2A4 366 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 SNX6Q9UNH7 406 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 TAF13Q15543 124 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 ADCK1Q86TW2 530 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 IFNLR1Q8IU57 520 aaPredicted RBP11.16□□□□□ -0.62
FN1-205ENST00000357867 PRRG4Q9BZD6 226 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 DPY30Q9C005 99 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 CNTNAP1P78357 1384 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 PIPSLA2A3N6 862 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 UNCXA6NJT0 531 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 CCNB1P14635 433 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 TCN1P20061 433 aaPredicted RBP11.16□□□□□ -0.62
FN1-205ENST00000357867 PEX19P40855 299 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 SKIV2L2P42285 1042 aaKnown RBP11.16□□□□□ -0.62
FN1-205ENST00000357867 NUDT2P50583 147 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 BIKQ13323 160 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 CAPRIN2Q6IMN6 1127 aaKnown RBP11.16□□□□□ -0.62
FN1-205ENST00000357867 KRT73Q86Y46 540 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 CNPPD1Q9BV87 410 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 PTCH2Q9Y6C5 1203 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 LRRC72A6NJI9 287 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 NT5C1B-RDH14C9J2C7 533 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 CCDC159P0C7I6 412 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 PGAM1P18669 254 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 AMPD1P23109 780 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 CD86P42081 329 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 USP4Q13107 963 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 TMED1Q13445 227 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 MILR1Q7Z6M3 343 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 C12orf50Q8NA57 414 aaPredicted RBP11.16□□□□□ -0.62
FN1-205ENST00000357867 GPR20Q99678 358 aa11.16□□□□□ -0.62
FN1-205ENST00000357867 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.16□□□□□ -0.621e-24■■■■□ 24.1
FN1-205ENST00000357867 NAA20P61599 178 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 NAB1Q13506 487 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 UBXN2BQ14CS0 331 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 POLR1BQ9H9Y6 1135 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 COMMD8Q9NX08 183 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 SLC45A1Q9Y2W3 748 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 SPATA31D3P0C874 917 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 C1DQ13901 141 aaKnown RBP11.15□□□□□ -0.62
FN1-205ENST00000357867 SPATA31D4Q6ZUB0 917 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 CERS4Q9HA82 394 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 ATAD3AQ9NVI7 634 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 ZNF780BQ9Y6R6 833 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 BNC1Q01954 994 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 CRY1Q16526 586 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 PRMT9Q6P2P2 845 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 VGLL2Q8N8G2 317 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 SCAIQ8N9R8 606 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 FNDC5Q8NAU1 212 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 FLCNQ8NFG4 579 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 NLGN2Q8NFZ4 835 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 ACTL9Q8TC94 416 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 ACTRT1Q8TDG2 376 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 UPF1Q92900 1129 aaKnown RBP eCLIP11.15□□□□□ -0.624e-14■□□□□ 8.6
FN1-205ENST00000357867 WDR24Q96S15 920 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 CCDC134Q9H6E4 229 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 MRTO4Q9UKD2 239 aaKnown RBP11.15□□□□□ -0.62
FN1-205ENST00000357867 INSL6Q9Y581 213 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 THRAP10827 490 aa11.15□□□□□ -0.62
FN1-205ENST00000357867 PTPN2P17706 415 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms