RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 AQP4P55087 323 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 CTBP1Q13363 440 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 SV2CQ496J9 727 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 GRTP1Q5TC63 336 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 VPS39Q96JC1 886 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 HNRNPABQ99729 332 aaKnown RBP20.85■□□□□ 0.93
COL13A1-202ENST00000357811 NUDT5Q9UKK9 219 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 DFFAO00273 331 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 AP2A1O95782 977 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 FAM200BP0CF97 657 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 SERPINB8P50452 374 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 NAGLUP54802 743 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 TBCCQ15814 346 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 SPANXN3Q5MJ09 141 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 HASPINQ8TF76 798 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 USP13Q92995 863 aaPredicted RBP20.85■□□□□ 0.93
COL13A1-202ENST00000357811 SGIP1Q9BQI5 828 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 PAAF1Q9BRP4 392 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 TINF2Q9BSI4 451 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 TKTL2Q9H0I9 626 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 SSX2IPQ9Y2D8 614 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 COX4I1P13073 169 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 PKNOX1P55347 436 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 CBLBQ13191 982 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 LBRQ14739 615 aaKnown RBP20.85■□□□□ 0.93
COL13A1-202ENST00000357811 GRAMD1BQ3KR37 738 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 CMPK2Q5EBM0 449 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 UBXN11Q5T124 520 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 CYS1Q717R9 158 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 DHDDSQ86SQ9 333 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 DENND6AQ8IWF6 608 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 KCTD4Q8WVF5 259 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 PCED1BQ96HM7 432 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 C1orf21Q9H246 121 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 WDR6Q9NNW5 1121 aaKnown RBP20.85■□□□□ 0.93
COL13A1-202ENST00000357811 IGSF9Q9P2J2 1179 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 GTF2IRD1Q9UHL9 959 aa20.85■□□□□ 0.93
COL13A1-202ENST00000357811 MAGEA13PA6NCF6 341 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 YBX3P16989 372 aaKnown RBP eCLIP20.84■□□□□ 0.93
COL13A1-202ENST00000357811 TCN1P20061 433 aaPredicted RBP20.84■□□□□ 0.93
COL13A1-202ENST00000357811 KLF10Q13118 480 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 PDCD2Q16342 344 aaPredicted RBP20.84■□□□□ 0.93
COL13A1-202ENST00000357811 IL31Q6EBC2 164 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 ZNF280DQ6N043 979 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 CCNYL1Q8N7R7 359 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 GDPD5Q8WTR4 605 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 CMTM5Q96DZ9 223 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 FTHL17Q9BXU8 183 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 CDH19Q9H159 772 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 EIF2B3Q9NR50 452 aaKnown RBP20.84■□□□□ 0.93
COL13A1-202ENST00000357811 GDAP2Q9NXN4 497 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 OR12D3Q9UGF7 316 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 NRCAMQ92823 1304 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 CCL15-CCL14A0A0B4J2E2 113 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 TMEM233B4DJY2 109 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 PTGESO14684 152 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 BUD23O43709 281 aaKnown RBP20.84■□□□□ 0.93
COL13A1-202ENST00000357811 USP10Q14694 798 aaKnown RBP20.84■□□□□ 0.93
COL13A1-202ENST00000357811 PAFAH1B3Q15102 231 aaKnown RBP20.84■□□□□ 0.93
COL13A1-202ENST00000357811 CCL15Q16663 113 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 SNX32Q86XE0 403 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 SMG8Q8ND04 991 aaKnown RBP20.84■□□□□ 0.93
COL13A1-202ENST00000357811 SMOQ99835 787 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 NAT9Q9BTE0 207 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 PLXNA1Q9UIW2 1896 aa20.84■□□□□ 0.93
COL13A1-202ENST00000357811 CASTOR2A6NHX0 329 aa20.83■□□□□ 0.93
COL13A1-202ENST00000357811 SNUPNO95149 360 aaKnown RBP20.83■□□□□ 0.93
COL13A1-202ENST00000357811 HARS2P49590 506 aaKnown RBP20.83■□□□□ 0.93
COL13A1-202ENST00000357811 SLC41A1Q8IVJ1 513 aa20.83■□□□□ 0.93
COL13A1-202ENST00000357811 CATSPER2Q96P56 530 aa20.83■□□□□ 0.93
COL13A1-202ENST00000357811 TCF7L2Q9NQB0 619 aa20.83■□□□□ 0.93
COL13A1-202ENST00000357811 PAPOLBQ9NRJ5 636 aaKnown RBP20.83■□□□□ 0.93
COL13A1-202ENST00000357811 PCDHB12Q9Y5F1 795 aa20.83■□□□□ 0.93
COL13A1-202ENST00000357811 AK5Q9Y6K8 562 aa20.83■□□□□ 0.93
COL13A1-202ENST00000357811 STX16-NPEPL1H3BU86 382 aa20.83■□□□□ 0.92
COL13A1-202ENST00000357811 TRIM13O60858 407 aa20.83■□□□□ 0.92
COL13A1-202ENST00000357811 TOMM70O94826 608 aa20.83■□□□□ 0.92
COL13A1-202ENST00000357811 MYL3P08590 195 aa20.83■□□□□ 0.92
COL13A1-202ENST00000357811 DLG1Q12959 904 aa20.83■□□□□ 0.92
COL13A1-202ENST00000357811 RPS27LQ71UM5 84 aaKnown RBP20.83■□□□□ 0.92
COL13A1-202ENST00000357811 SHCBP1Q8NEM2 672 aa20.83■□□□□ 0.92
COL13A1-202ENST00000357811 IPMKQ8NFU5 416 aa20.83■□□□□ 0.92
COL13A1-202ENST00000357811 SENP8Q96LD8 212 aa20.83■□□□□ 0.92
COL13A1-202ENST00000357811 GBP5Q96PP8 586 aa20.83■□□□□ 0.92
COL13A1-202ENST00000357811 GAD1Q99259 594 aa20.83■□□□□ 0.92
COL13A1-202ENST00000357811 ACE2Q9BYF1 805 aaPredicted RBP20.83■□□□□ 0.92
COL13A1-202ENST00000357811 WDCPQ9H6R7 721 aa20.83■□□□□ 0.92
COL13A1-202ENST00000357811 DNAJC28Q9NX36 388 aa20.83■□□□□ 0.92
COL13A1-202ENST00000357811 LRIG2O94898 1065 aa20.82■□□□□ 0.92
COL13A1-202ENST00000357811 PIGNO95427 931 aa20.82■□□□□ 0.92
COL13A1-202ENST00000357811 CTSHP09668 335 aa20.82■□□□□ 0.92
COL13A1-202ENST00000357811 GRIA4P48058 902 aa20.82■□□□□ 0.92
COL13A1-202ENST00000357811 RPL34P49207 117 aaKnown RBP20.82■□□□□ 0.92
COL13A1-202ENST00000357811 MPP1Q00013 466 aa20.82■□□□□ 0.92
COL13A1-202ENST00000357811 ARL13AQ5H913 290 aaPredicted RBP20.82■□□□□ 0.92
COL13A1-202ENST00000357811 TMEM135Q86UB9 458 aa20.82■□□□□ 0.92
COL13A1-202ENST00000357811 SNX31Q8N9S9 440 aa20.82■□□□□ 0.92
COL13A1-202ENST00000357811 ZMIZ2Q8NF64 920 aa20.82■□□□□ 0.92
COL13A1-202ENST00000357811 OR6Y1Q8NGX8 325 aa20.82■□□□□ 0.92
COL13A1-202ENST00000357811 EMID1Q96A84 441 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms