RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 MLF2Q15773 248 aaPredicted RBP25.94■■□□□ 1.74
SSBP3-202ENST00000357475 MBLAC2Q68D91 279 aa25.94■■□□□ 1.74
SSBP3-202ENST00000357475 ATPAF2Q8N5M1 289 aa25.94■■□□□ 1.74
SSBP3-202ENST00000357475 ZNF557Q8N988 423 aaPredicted RBP25.94■■□□□ 1.74
SSBP3-202ENST00000357475 DCAF4L2Q8NA75 395 aa25.94■■□□□ 1.74
SSBP3-202ENST00000357475 CCNYQ8ND76 341 aa25.94■■□□□ 1.74
SSBP3-202ENST00000357475 SLC35B2Q8TB61 432 aa25.94■■□□□ 1.74
SSBP3-202ENST00000357475 CYB5D2Q8WUJ1 264 aa25.94■■□□□ 1.74
SSBP3-202ENST00000357475 PDFQ9HBH1 243 aa25.94■■□□□ 1.74
SSBP3-202ENST00000357475 HCN2Q9UL51 889 aa25.94■■□□□ 1.74
SSBP3-202ENST00000357475 KRIT1O00522 736 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 CD160O95971 181 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 MT-CO1P00395 513 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 OXCT1P55809 520 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 SLC12A1Q13621 1099 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 FSTL4Q6MZW2 842 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 HDAC11Q96DB2 347 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 ZDHHC4Q9NPG8 344 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 RAD54BQ9Y620 910 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.93■■□□□ 1.74
SSBP3-202ENST00000357475 H7C0C1 242 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 PEX11BO96011 259 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 RBP3P10745 1247 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 ATP5OP48047 213 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 STK19P49842 368 aaPredicted RBP25.93■■□□□ 1.74
SSBP3-202ENST00000357475 NRLP54845 237 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 AP1B1Q10567 949 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 PDK1Q15118 436 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 PRKD1Q15139 912 aaPredicted RBP25.93■■□□□ 1.74
SSBP3-202ENST00000357475 TTC27Q6P3X3 843 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 TTC13Q8NBP0 860 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 TTC17Q96AE7 1141 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 ZNF419Q96HQ0 510 aaPredicted RBP25.93■■□□□ 1.74
SSBP3-202ENST00000357475 RPL10LQ96L21 214 aaKnown RBP25.93■■□□□ 1.74
SSBP3-202ENST00000357475 QKIQ96PU8 341 aaKnown RBP eCLIP25.93■■□□□ 1.74
SSBP3-202ENST00000357475 NAP1L3Q99457 506 aaPredicted RBP25.93■■□□□ 1.74
SSBP3-202ENST00000357475 CIPCQ9C0C6 399 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 ARHGEF3Q9NR81 526 aa25.93■■□□□ 1.74
SSBP3-202ENST00000357475 TBC1D3BA6NDS4 549 aa25.92■■□□□ 1.74
SSBP3-202ENST00000357475 K7ERQ8 282 aa25.92■■□□□ 1.74
SSBP3-202ENST00000357475 PRAMEF11O60813 436 aa25.92■■□□□ 1.74
SSBP3-202ENST00000357475 EGFP01133 1207 aa25.92■■□□□ 1.74
SSBP3-202ENST00000357475 APODP05090 189 aa25.92■■□□□ 1.74
SSBP3-202ENST00000357475 MX2P20592 715 aa25.92■■□□□ 1.74
SSBP3-202ENST00000357475 GRIA2P42262 883 aa25.92■■□□□ 1.74
SSBP3-202ENST00000357475 PAFAH1B1P43034 410 aa25.92■■□□□ 1.74
SSBP3-202ENST00000357475 KCNJ1P48048 391 aa25.92■■□□□ 1.74
SSBP3-202ENST00000357475 PPIDQ08752 370 aaKnown RBP25.92■■□□□ 1.74
SSBP3-202ENST00000357475 EMC10Q5UCC4 262 aa25.92■■□□□ 1.74
SSBP3-202ENST00000357475 MAIP1Q8WWC4 291 aa25.92■■□□□ 1.74
SSBP3-202ENST00000357475 FAM3CQ92520 227 aa25.92■■□□□ 1.74
SSBP3-202ENST00000357475 SP110Q9HB58 689 aa25.92■■□□□ 1.74
SSBP3-202ENST00000357475 RBM12Q9NTZ6 932 aaKnown RBP25.92■■□□□ 1.74
SSBP3-202ENST00000357475 RNF14Q9UBS8 474 aa25.92■■□□□ 1.74
SSBP3-202ENST00000357475 MYO18AQ92614 2054 aaKnown RBP25.91■■□□□ 1.74
SSBP3-202ENST00000357475 K7EQS6 105 aa25.91■■□□□ 1.74
SSBP3-202ENST00000357475 PPP1R12AO14974 1030 aaPredicted RBP25.91■■□□□ 1.74
SSBP3-202ENST00000357475 MCF2LO15068 1137 aa25.91■■□□□ 1.74
SSBP3-202ENST00000357475 GLULP15104 373 aa25.91■■□□□ 1.74
SSBP3-202ENST00000357475 POLR2EP19388 210 aaKnown RBP25.91■■□□□ 1.74
SSBP3-202ENST00000357475 RBL1P28749 1068 aa25.91■■□□□ 1.74
SSBP3-202ENST00000357475 ETFBP38117 255 aa25.91■■□□□ 1.74
SSBP3-202ENST00000357475 OASLQ15646 514 aaKnown RBP25.91■■□□□ 1.74
SSBP3-202ENST00000357475 CCNG2Q16589 344 aa25.91■■□□□ 1.74
SSBP3-202ENST00000357475 TMEM196Q5HYL7 178 aa25.91■■□□□ 1.74
SSBP3-202ENST00000357475 WFIKKN2Q8TEU8 576 aa25.91■■□□□ 1.74
SSBP3-202ENST00000357475 TFB1MQ8WVM0 346 aaKnown RBP25.91■■□□□ 1.74
SSBP3-202ENST00000357475 TSGA13Q96PP4 275 aa25.91■■□□□ 1.74
SSBP3-202ENST00000357475 UHRF1Q96T88 793 aaPredicted RBP25.91■■□□□ 1.74
SSBP3-202ENST00000357475 C2orf49Q9BVC5 232 aaPredicted RBP25.91■■□□□ 1.74
SSBP3-202ENST00000357475 CEP41Q9BYV8 373 aa25.91■■□□□ 1.74
SSBP3-202ENST00000357475 RRAGDQ9NQL2 400 aaPredicted RBP25.91■■□□□ 1.74
SSBP3-202ENST00000357475 ELOVL2Q9NXB9 296 aa25.91■■□□□ 1.74
SSBP3-202ENST00000357475 FBXL21Q9UKT6 434 aa25.91■■□□□ 1.74
SSBP3-202ENST00000357475 KCNK1O00180 336 aa25.9■■□□□ 1.74
SSBP3-202ENST00000357475 XRCC4Q13426 336 aa25.9■■□□□ 1.74
SSBP3-202ENST00000357475 DMC1Q14565 340 aa25.9■■□□□ 1.74
SSBP3-202ENST00000357475 CYP1B1Q16678 543 aa25.9■■□□□ 1.74
SSBP3-202ENST00000357475 PTPRNQ16849 979 aa25.9■■□□□ 1.74
SSBP3-202ENST00000357475 WHAMMP3Q1A5X7 153 aa25.9■■□□□ 1.74
SSBP3-202ENST00000357475 SLC45A4Q5BKX6 768 aa25.9■■□□□ 1.74
SSBP3-202ENST00000357475 DARS2Q6PI48 645 aaKnown RBP25.9■■□□□ 1.74
SSBP3-202ENST00000357475 BZW1Q7L1Q6 419 aaKnown RBP25.9■■□□□ 1.74
SSBP3-202ENST00000357475 CCDC13Q8IYE1 715 aa25.9■■□□□ 1.74
SSBP3-202ENST00000357475 UBALD2Q8IYN6 164 aa25.9■■□□□ 1.74
SSBP3-202ENST00000357475 MRGPRX3Q96LB0 322 aa25.9■■□□□ 1.74
SSBP3-202ENST00000357475 TMEM121Q9BTD3 319 aa25.9■■□□□ 1.74
SSBP3-202ENST00000357475 DDX47Q9H0S4 455 aaKnown RBP25.9■■□□□ 1.74
SSBP3-202ENST00000357475 WNT16Q9UBV4 365 aa25.9■■□□□ 1.74
SSBP3-202ENST00000357475 HPCAL4Q9UM19 191 aa25.9■■□□□ 1.74
SSBP3-202ENST00000357475 A0A0A0MRY4 1105 aa25.89■■□□□ 1.74
SSBP3-202ENST00000357475 NCAM2O15394 837 aa25.89■■□□□ 1.74
SSBP3-202ENST00000357475 SMAD6O43541 496 aaKnown RBP25.89■■□□□ 1.74
SSBP3-202ENST00000357475 CHRM1P11229 460 aaPredicted RBP25.89■■□□□ 1.74
SSBP3-202ENST00000357475 CLCN6P51797 869 aa25.89■■□□□ 1.74
SSBP3-202ENST00000357475 GDF10P55107 478 aa25.89■■□□□ 1.74
SSBP3-202ENST00000357475 SEC13P55735 322 aa25.89■■□□□ 1.74
SSBP3-202ENST00000357475 IL10RBQ08334 325 aa25.89■■□□□ 1.74
SSBP3-202ENST00000357475 C2orf54Q08AI8 447 aa25.89■■□□□ 1.74
SSBP3-202ENST00000357475 BYSLQ13895 437 aaKnown RBP25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms