RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 MAFO75444 373 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 GSRP00390 522 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 FUCA1P04066 466 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 VDRP11473 427 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 P4HA1P13674 534 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 GOT1P17174 413 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 MX2P20592 715 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 CYP3A5P20815 502 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 HMGB2P26583 209 aaKnown RBP8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 FDFT1P37268 417 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 NDUFA5Q16718 116 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 Q3C1V9 767 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 FSCBQ5H9T9 825 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 DHRS4L2Q6PKH6 230 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 C11orf74Q86VG3 221 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 MARVELD2Q8N4S9 558 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 MAPK15Q8TD08 544 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 JADE3Q92613 823 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 LRRC39Q96DD0 335 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 KCNK16Q96T55 309 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 SORT1Q99523 831 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 NUF2Q9BZD4 464 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 GID8Q9NWU2 228 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 SYBUQ9NX95 663 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 GIN1Q9NXP7 522 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 DCDC2Q9UHG0 476 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 FBXO9Q9UK97 447 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 ITGA11Q9UKX5 1188 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 AP4E1Q9UPM8 1137 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 SORCS3Q9UPU3 1222 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 GJA3Q9Y6H8 435 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 K7EPI3 171 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 HCRTO43612 131 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 FARP2O94887 1054 aaPredicted RBP8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 CHRNGP07510 517 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 ADORA2BP29275 332 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 IRF9Q00978 393 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 KLF10Q13118 480 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 TNFAIP1Q13829 316 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 MXD4Q14582 209 aaPredicted RBP8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 PDK1Q15118 436 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 RARS2Q5T160 578 aaKnown RBP8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 IER5Q5VY09 327 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 TMEM198Q66K66 360 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 EFCAB12Q6NXP0 572 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 STRA8Q7Z7C7 330 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 RTKN2Q8IZC4 609 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 PQLC1Q8N2U9 271 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 CENPSQ8N2Z9 138 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 TDRD5Q8NAT2 981 aaKnown RBP8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 HTR3CQ8WXA8 447 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 SEPT1Q8WYJ6 367 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 ZNF669Q96BR6 464 aaPredicted RBP8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 AGAP2Q99490 1192 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 NT5C1AQ9BXI3 368 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 NIFKQ9BYG3 293 aaKnown RBP8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 SEMA6AQ9H2E6 1030 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 VTA1Q9NP79 307 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 TCF7L2Q9NQB0 619 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 TMPRSS4Q9NRS4 437 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 PPP1R1BQ9UD71 204 aaPredicted RBP8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 LY75O60449 1722 aa8.4□□□□□ -1.07
CDC42SE1-201ENST00000357235 PAPSS1O43252 624 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 B4GALT4O60513 344 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 TPPPO94811 219 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 BAIAP3O94812 1187 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 IQCF3P0C7M6 154 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 FGFR3P22607 806 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 GRK2P25098 689 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 PSMB4P28070 264 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 CDK9P50750 372 aaKnown RBP8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 ART3Q13508 389 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 NR1D2Q14995 579 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 FAM209AQ5JX71 171 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 FKBP1CQ5VVH2 108 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 NIPAL1Q6NVV3 410 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 ELMSAN1Q6PJG2 1045 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 NAPRTQ6XQN6 538 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 LPCAT2Q7L5N7 544 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 PID1Q7Z2X4 250 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 AHI1Q8N157 1196 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 DCLK2Q8N568 766 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 BHLHE22Q8NFJ8 381 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 OR6B3Q8NGW1 331 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 NDRG1Q92597 394 aaKnown RBP8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 BORCS5Q969J3 196 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 EME1Q96AY2 570 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 SCYL1Q96KG9 808 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 SNX15Q9NRS6 342 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 MOCS1Q9NZB8 636 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 AP4B1Q9Y6B7 739 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 SF3B1O75533 1304 aaKnown RBP eCLIP8.39□□□□□ -1.079e-7■■■■■ 35.8
CDC42SE1-201ENST00000357235 ACKR2O00590 384 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 XPO1O14980 1071 aaKnown RBP8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 DENRO43583 198 aaKnown RBP8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 CSPG5O95196 566 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 XRCC1P18887 633 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 MPSTP25325 297 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 AVPR1AP37288 418 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 TUFMP49411 452 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms