RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 SPEF1Q9Y4P9 236 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 COL5A2P05997 1499 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 DHRS12A0PJE2 317 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 C3orf70A6NLC5 250 aaPredicted RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 DCXO43602 365 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 FAM155BO75949 473 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 OGNP20774 298 aaKnown RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 SLC26A3P40879 764 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 PIK3CGP48736 1102 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 BST2Q10589 180 aaKnown RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 NPY5RQ15761 445 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 AURKBQ96GD4 344 aaPredicted RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 MBOAT7Q96N66 472 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 PCIF1Q9H4Z3 704 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 NECTIN3Q9NQS3 549 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 BHMG1C9JSJ3 638 aaPredicted RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ANKRD63C9JTQ0 380 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 NDUFS2O75306 463 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 MYO1DO94832 1006 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 PTX3P26022 381 aaPredicted RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 YWHABP31946 246 aaKnown RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 TRAF3Q13114 568 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 TTLL12Q14166 644 aaPredicted RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 SAPCD2Q86UD0 394 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 CLEC4FQ8N1N0 589 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 MARCH10Q8NA82 808 aaPredicted RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ATL1Q8WXF7 558 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 MTG1Q9BT17 334 aaPredicted RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 FSD1LQ9BXM9 530 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ANKRD60Q9BZ19 345 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 RAB6BQ9NRW1 208 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ING3Q9NXR8 418 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ATP6V1HQ9UI12 483 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ACOT9Q9Y305 439 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 DENND3A2RUS2 1198 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 CCDC182A6NF36 153 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 PI4K2BG5E9Z4 385 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 TYROBPO43914 113 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 CST8O60676 142 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 GPD1P21695 349 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 POLD3Q15054 466 aaPredicted RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ZFP69Q49AA0 526 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 C3orf67Q6ZVT6 689 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 HPS6Q86YV9 775 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 HEPHQ9BQS7 1158 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ZC3H12CQ9C0D7 883 aaKnown RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 RBAKQ9NYW8 714 aaPredicted RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 STUB1Q9UNE7 303 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 NR2E1Q9Y466 385 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 PDPK1O15530 556 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 DLDP09622 509 aaKnown RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 RFC4P35249 363 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 C1DQ13901 141 aaKnown RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 CACHD1Q5VU97 1274 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 CGB2Q6NT52 195 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 DENND5BQ6ZUT9 1274 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 TMIEQ8NEW7 156 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ZSCAN18Q8TBC5 510 aaPredicted RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ATF5Q9Y2D1 282 aaPredicted RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 KLHL20Q9Y2M5 609 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 SNCAIPQ9Y6H5 919 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 HSPE1-MOB4S4R3N1 261 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 USP17L8P0C7I0 530 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 T-ENOLP0DO92 83 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 CASP2P42575 452 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 TBCELQ5QJ74 424 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 PTF1AQ7RTS3 328 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 KBTBD2Q8IY47 623 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 CCNYL1Q8N7R7 359 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 CD101Q93033 1021 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 SLC4A5Q9BY07 1137 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 IL22Q9GZX6 179 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 EPB41L4BQ9H329 900 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 TAS2R14Q9NYV8 317 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ZBTB1Q9Y2K1 713 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 A3GALT2U3KPV4 340 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 F5H6K3 240 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 GYS1P13807 737 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 KLRC2P26717 231 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 VAC14Q08AM6 782 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ACAP2Q15057 778 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 UBE2SQ16763 222 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 CCDC28AQ8IWP9 274 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 LRRC47Q8N1G4 583 aaKnown RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 SLC39A3Q9BRY0 314 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 JMJD4Q9H9V9 463 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 AGO2Q9UKV8 859 aaKnown RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 AAR2Q9Y312 384 aaKnown RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 CCNKO75909 580 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 FUT4P22083 530 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 FGFR3P22607 806 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 DCKP27707 260 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ATP4BP51164 291 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 GNG2P59768 71 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 MPP2Q14168 576 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 DGKDQ16760 1214 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 TWF2Q6IBS0 349 aaKnown RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ZNF773Q6PK81 442 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 SLCO6A1Q86UG4 719 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 DEPDC4Q8N2C3 294 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms