RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SPIDRQ14159 915 aa11.68□□□□□ -0.54
SPTBN1-202ENST00000356805 PIH1D1Q9NWS0 290 aaKnown RBP11.68□□□□□ -0.54
SPTBN1-202ENST00000356805 MAPRE3Q9UPY8 281 aa11.68□□□□□ -0.54
SPTBN1-202ENST00000356805 IFNA16P05015 189 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 INO80DQ53TQ3 878 aaPredicted RBP11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 PGBD2Q6P3X8 592 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 TCAIMQ8N3R3 496 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 ZCCHC9Q8N567 271 aaKnown RBP11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 CLIC5Q9NZA1 410 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 VPS51Q9UID3 782 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 LRRC7Q96NW7 1537 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 MOXD2PA6NHM9 499 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 NDUFS2O75306 463 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 SLC25A27O95847 323 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 PLEKP08567 350 aaPredicted RBP11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 OR1E1P30953 314 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 STARP49675 285 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 ARHGDIBP52566 201 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 MYBPC1Q00872 1141 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 RABL6Q3YEC7 729 aaPredicted RBP11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 SBK1Q52WX2 424 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 CCSAPQ6IQ19 270 aaPredicted RBP11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 PJA1Q8NG27 643 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 STARD8Q92502 1023 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 CEP41Q9BYV8 373 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 KCNH7Q9NS40 1196 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 GPATCH2LQ9NWQ4 482 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 DSEQ9UL01 958 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 CDH9Q9ULB4 789 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 GAS2O43903 313 aaKnown RBP11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 TRIM3O75382 744 aaPredicted RBP11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 ACADVLP49748 655 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 BCAT1P54687 386 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 ERVK-9P63128 1117 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 SMYD1Q8NB12 490 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 TCP10LQ8TDR4 215 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 GTF3C2Q8WUA4 911 aaPredicted RBP11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 RNF145Q96MT1 663 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 NDUFAF1Q9Y375 327 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 LSM1O15116 133 aaKnown RBP11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 ANPEPP15144 967 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 TYMPP19971 482 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 QPRTQ15274 297 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 SUN5Q8TC36 379 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 ACTRT2Q8TDY3 377 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 CDK5RAP1Q96SZ6 601 aaKnown RBP11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 DGCR6LQ9BY27 220 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.67□□□□□ -0.542e-6■■■■□ 20.1
SPTBN1-202ENST00000356805 ZNF232Q9UNY5 417 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 NRKQ7Z2Y5 1582 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 MAP3K4Q9Y6R4 1608 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 VPS72Q15906 364 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 ADPRHL2Q9NX46 363 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 FAM205CA6NFA0 338 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 PRODHO43272 600 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 CASP5P51878 434 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 PRKAG1P54619 331 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 MOXD1Q6UVY6 613 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 RBM44Q6ZP01 1051 aaKnown RBP11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 PIWIL2Q8TC59 973 aaKnown RBP11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 REPS1Q96D71 796 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 KIAA1683Q9H0B3 1180 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 MID1IP1Q9NPA3 183 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 WBP11Q9Y2W2 641 aaKnown RBP11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 WWP2O00308 870 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 PROSCO94903 275 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 GP5P40197 560 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 COPZ1P61923 177 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 FASTKQ14296 549 aaKnown RBP11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 GRTP1Q5TC63 336 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 COLGALT1Q8NBJ5 622 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 FAM84BQ96KN1 310 aaPredicted RBP11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 PLEKHG4BQ96PX9 1271 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 MYOZ2Q9NPC6 264 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 PHF11Q9UIL8 331 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 RAB26Q9ULW5 256 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 PNPLA6Q8IY17 1366 aa11.67□□□□□ -0.54
SPTBN1-202ENST00000356805 KPNA5O15131 536 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 MYBL2P10244 700 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 DRD4P21917 467 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 GARTP22102 1010 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 BNIP2Q12982 314 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 LRRC17Q8N6Y2 441 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 MYDGFQ969H8 173 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 SENP6Q9GZR1 1112 aaPredicted RBP11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 GIN1Q9NXP7 522 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 NPHP4O75161 1426 aaPredicted RBP11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 BTNL10A8MVZ5 291 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 GMFGO60234 142 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 CRABP2P29373 138 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 CYP4F2P78329 520 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 ENPEPQ07075 957 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 CYP4F3Q08477 520 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 TRIM28Q13263 835 aaKnown RBP11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 MPP3Q13368 585 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 XRRA1Q6P2D8 792 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 TRIM74Q86UV6 250 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 TRIM73Q86UV7 250 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 TRPV3Q8NET8 790 aa11.66□□□□□ -0.54
SPTBN1-202ENST00000356805 POP1Q99575 1024 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms