RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 SPA17Q15506 151 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 GEN1Q17RS7 908 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 RAB6CQ53S08 254 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 PITRM1Q5JRX3 1037 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ARTNQ5T4W7 220 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 SH3PXD2AQ5TCZ1 1133 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 MBLAC2Q68D91 279 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 CXorf57Q6NSI4 855 aaKnown RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 PKN3Q6P5Z2 889 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 SETD3Q86TU7 594 aaPredicted RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 WDR5BQ86VZ2 330 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 CIR1Q86X95 450 aaPredicted RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 TMEM139Q8IV31 216 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ZNF295-AS1Q8N0V1 137 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 KDM1BQ8NB78 822 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 CCDC112Q8NEF3 446 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 NELL1Q92832 810 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 IGSF8Q969P0 613 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 TTC17Q96AE7 1141 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 CALR3Q96L12 384 aaKnown RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 PEBP4Q96S96 227 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 PPP1R9BQ96SB3 815 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 GABRG3Q99928 467 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 SNRNP25Q9BV90 132 aaKnown RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 PACSIN1Q9BY11 444 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 TRIM7Q9C029 511 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ZYG11BQ9C0D3 744 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 SIK2Q9H0K1 926 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 RAB6CQ9H0N0 254 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 FBRSQ9HAH7 460 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 GRPEL1Q9HAV7 217 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ABCB8Q9NUT2 735 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 TMEM248Q9NWD8 314 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ELOVL2Q9NXB9 296 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 THAP10Q9P2Z0 257 aaPredicted RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ZNF212Q9UDV6 495 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 CLEC4EQ9ULY5 219 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 AP4E1Q9UPM8 1137 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 SLC8A2Q9UPR5 921 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 SNX10Q9Y5X0 201 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 XIRP2A4UGR9 3374 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 UNC80Q8N2C7 3258 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 CCDC163A0A0D9SF12 145 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 CXorf51AA0A1B0GTR3 108 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ILVBLA1L0T0 632 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 SOWAHDA6NJG2 315 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 BTNL10A8MVZ5 291 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 PRRT4C9JH25 899 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 K7ESF4 209 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 MYO1FO00160 1098 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 TRIM24O15164 1050 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ALDH1A2O94788 518 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 NDUFA10O95299 355 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ATP5BP06576 529 aaKnown RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 SRPRAP08240 638 aaKnown RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 SP9P0CG40 484 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 POLR2EP19388 210 aaKnown RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 MIPP30301 263 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 NTSR1P30989 418 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 CD70P32970 193 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 CSKP41240 450 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ARHGAP25P42331 645 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 MAGEA1P43355 309 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 IRAK1P51617 712 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 DGKEP52429 567 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 NRLP54845 237 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 TPI1P60174 286 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 SLC25A11Q02978 314 aaKnown RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 SULT2A1Q06520 285 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 TCF15Q12870 199 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ZNF177Q13360 481 aaPredicted RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 HADHQ16836 314 aaKnown RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 PLEKHG6Q3KR16 790 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 FNDC3BQ53EP0 1204 aaKnown RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 SCYL2Q6P3W7 929 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ZC3H14Q6PJT7 736 aaKnown RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 CYP4V2Q6ZWL3 525 aaPredicted RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ADIPOR2Q86V24 386 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 NLRP14Q86W24 1093 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 SFTPA1Q8IWL2 248 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 MAML2Q8IZL2 1156 aaPredicted RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 CFAP52Q8N1V2 620 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 CAMKK1Q8N5S9 505 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ALLCQ8N6M5 410 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 DCAF4L2Q8NA75 395 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 IL17RCQ8NAC3 791 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 TXNDC5Q8NBS9 432 aaKnown RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 SPC24Q8NBT2 197 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 TSTD1Q8NFU3 115 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 BAG1Q99933 345 aaPredicted RBP4.08□□□□□ -1.76
CNOT4-202ENST00000356162 CIPCQ9C0C6 399 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 RUBCNLQ9H714 662 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 CATSPERBQ9H7T0 1116 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 ZSCAN32Q9NX65 697 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 DONSONQ9NYP3 566 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 OR12D3Q9UGF7 316 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 HCN2Q9UL51 889 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 USP18Q9UMW8 372 aa4.08□□□□□ -1.76
CNOT4-202ENST00000356162 TBC1D30Q9Y2I9 924 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms