RNA–Protein interactions for RNA: ENST00000356100.6

PTPRT-201, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-201ENST00000356100 SEMA6BQ9H3T3 888 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 CXorf56Q9H5V9 222 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 SLC9A8Q9Y2E8 581 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 V9GYQ6 96 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 AKAP12Q02952 1782 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 CATP04040 527 aaKnown RBP6.11□□□□□ -1.43
PTPRT-201ENST00000356100 ETS1P14921 441 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 PARP6Q2NL67 630 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 CBWD3Q5JTY5 395 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 CBWD5Q5RIA9 395 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 TMEM79Q9BSE2 394 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 ATP13A3Q9H7F0 1226 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 SPAG4Q9NPE6 437 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 SPG21Q9NZD8 308 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 CRNNQ9UBG3 495 aaPredicted RBP6.11□□□□□ -1.43
PTPRT-201ENST00000356100 A0A096LPK6 155 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 SLC2A4P14672 509 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 NPR3P17342 541 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 YY1P25490 414 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 KLK7P49862 253 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 HERVK_113P62684 666 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 CRY1Q16526 586 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 PLEKHA7Q6IQ23 1121 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 DENND6AQ8IWF6 608 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 OSGEPL1Q9H4B0 414 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 TNFSF13BQ9Y275 285 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 SNX8Q9Y5X2 465 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 SIGLEC16A6NMB1 481 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 SERPINB7O75635 380 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 ATG7O95352 703 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 CLK3P49761 638 aaKnown RBP6.11□□□□□ -1.43
PTPRT-201ENST00000356100 CLCN5P51795 746 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 POU6F1Q14863 301 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 TCAIMQ8N3R3 496 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 OR6Y1Q8NGX8 325 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 FBXO25Q8TCJ0 367 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 PRMT6Q96LA8 375 aaPredicted RBP6.11□□□□□ -1.43
PTPRT-201ENST00000356100 ASAH2Q9NR71 780 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 TRAV19A0A0A6YYK7 116 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 BBIP1A8MTZ0 92 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 AVILO75366 819 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 FGF1P05230 155 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 MYBL2P10244 700 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 HTR1BP28222 390 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 R3HDM1Q15032 1099 aaKnown RBP6.11□□□□□ -1.43
PTPRT-201ENST00000356100 SMAD1Q15797 465 aaKnown RBP6.11□□□□□ -1.43
PTPRT-201ENST00000356100 FSCN1Q16658 493 aaKnown RBP6.11□□□□□ -1.43
PTPRT-201ENST00000356100 GLRA4Q5JXX5 417 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 PLPPR4Q7Z2D5 763 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 ZDHHC13Q8IUH4 622 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 REXO1L1PQ8IX06 675 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 OR2W6PQ8NHA6 318 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 TIFAQ96CG3 184 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 BBS4Q96RK4 519 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 TRPC4Q9UBN4 977 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 ZMYM5Q9UJ78 669 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 C3orf18Q9UK00 162 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 LZTS1Q9Y250 596 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 RWDD3Q9Y3V2 267 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 RICTORQ6R327 1708 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 ZNF286BP0CG31 522 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 INSRRP14616 1297 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 ITPK1Q13572 414 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 OASLQ15646 514 aaKnown RBP6.11□□□□□ -1.43
PTPRT-201ENST00000356100 ZNF549Q6P9A3 640 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 FAM228AQ86W67 206 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 ITFG1Q8TB96 612 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 AHCYL2Q96HN2 611 aaKnown RBP6.11□□□□□ -1.43
PTPRT-201ENST00000356100 SLC38A2Q96QD8 506 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 LRRC4BQ9NT99 713 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 DDX43Q9NXZ2 648 aaKnown RBP6.11□□□□□ -1.43
PTPRT-201ENST00000356100 MARCH2Q9P0N8 246 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 PEX1O43933 1283 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 CCNT2O60583 730 aaKnown RBP6.11□□□□□ -1.43
PTPRT-201ENST00000356100 THOP1P52888 689 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 NET1Q7Z628 596 aaPredicted RBP6.11□□□□□ -1.43
PTPRT-201ENST00000356100 FAM131BQ86XD5 332 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 GPSM1Q86YR5 675 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 CLEC10AQ8IUN9 316 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 KIAA0895Q8NCT3 520 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 RP9Q8TA86 221 aaKnown RBP6.11□□□□□ -1.43
PTPRT-201ENST00000356100 TRPC4APQ8TEL6 797 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 ATG4AQ8WYN0 398 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 SH2D3AQ9BRG2 576 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 PDCD2LQ9BRP1 358 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 CDHR5Q9HBB8 845 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 CDH9Q9ULB4 789 aa6.11□□□□□ -1.43
PTPRT-201ENST00000356100 FTH1P02794 183 aa6.1□□□□□ -1.43
PTPRT-201ENST00000356100 CCDC130P13994 396 aa6.1□□□□□ -1.43
PTPRT-201ENST00000356100 ELK3P41970 407 aa6.1□□□□□ -1.43
PTPRT-201ENST00000356100 GRIK3Q13003 919 aa6.1□□□□□ -1.43
PTPRT-201ENST00000356100 AGKQ53H12 422 aa6.1□□□□□ -1.43
PTPRT-201ENST00000356100 IRGCQ6NXR0 463 aa6.1□□□□□ -1.43
PTPRT-201ENST00000356100 MYLK2Q9H1R3 596 aa6.1□□□□□ -1.43
PTPRT-201ENST00000356100 INTS7Q9NVH2 962 aaKnown RBP6.1□□□□□ -1.43
PTPRT-201ENST00000356100 SIK3Q9Y2K2 1263 aa6.1□□□□□ -1.43
PTPRT-201ENST00000356100 WDR27A2RRH5 827 aa6.1□□□□□ -1.43
PTPRT-201ENST00000356100 H0YC42 278 aa6.1□□□□□ -1.43
PTPRT-201ENST00000356100 DNAJA2O60884 412 aa6.1□□□□□ -1.43
PTPRT-201ENST00000356100 HSMCR30P0CW71 290 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms