RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ATP9AO75110 1047 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 NRF1Q16656 503 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 FBXO30Q8TB52 745 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 MAGEE2Q8TD90 523 aaPredicted RBP17.5■□□□□ 0.39
COL27A1-201ENST00000356083 SEMA6AQ9H2E6 1030 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 KANSL3Q9P2N6 904 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 SLC12A4Q9UP95 1085 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 ZCCHC7Q8N3Z6 543 aaKnown RBP17.5■□□□□ 0.39
COL27A1-201ENST00000356083 CRELD1Q96HD1 420 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 TRIM2Q9C040 744 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 EHD3Q9NZN3 535 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 KNTC1P50748 2209 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 CCNYL3P0C7X3 344 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 CYP2C8P10632 490 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 SLC7A2P52569 658 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 RAB25P57735 213 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 GFOD2Q3B7J2 385 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 RIBC1Q8N443 379 aaPredicted RBP17.5■□□□□ 0.39
COL27A1-201ENST00000356083 REEP1Q9H902 201 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 TRAV19A0A0A6YYK7 116 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 ALLCQ8N6M5 410 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 CERS4Q9HA82 394 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 ACOT9Q9Y305 439 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 OGTO15294 1046 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 SPATA31D3P0C874 917 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 NQO1P15559 274 aaKnown RBP17.49■□□□□ 0.39
COL27A1-201ENST00000356083 S100A3P33764 101 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 SPATA31D4Q6ZUB0 917 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 ADGRA3Q8IWK6 1321 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 UBDO15205 165 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 MYBL2P10244 700 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 MBTD1Q05BQ5 628 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 MRPL17Q9NRX2 175 aaKnown RBP17.49■□□□□ 0.39
COL27A1-201ENST00000356083 CCT8L1PA6NM43 557 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 CPA3P15088 417 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 BGNP21810 368 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 S100A1P23297 94 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 KAT5Q92993 513 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 MTG1Q9BT17 334 aaPredicted RBP17.49■□□□□ 0.39
COL27A1-201ENST00000356083 PCDHGB3Q9Y5G1 929 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 A0A0X1KG70 313 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 FFAR3O14843 346 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 GPR42O15529 346 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 AVILO75366 819 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 ERAL1O75616 437 aaKnown RBP17.49■□□□□ 0.39
COL27A1-201ENST00000356083 CENPCQ03188 943 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 RGS1Q08116 209 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 RUBCNQ92622 972 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 NCK1P16333 377 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 HTR1BP28222 390 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 PDIA5Q14554 519 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 ITFG1Q8TB96 612 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 SELENOMQ8WWX9 145 aa17.49■□□□□ 0.39
COL27A1-201ENST00000356083 SEPT4O43236 478 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 TLL1O43897 1013 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 RASGRP1O95267 797 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 CCDC166P0CW27 439 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 CXCL8P10145 99 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 KPNB1Q14974 876 aaKnown RBP17.48■□□□□ 0.39
COL27A1-201ENST00000356083 KCTD21Q4G0X4 260 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 CAPSLQ8WWF8 208 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 CATSPERZQ9NTU4 200 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 CCL23P55773 120 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 SF1Q15637 639 aaKnown RBP17.48■□□□□ 0.39
COL27A1-201ENST00000356083 ZDHHC13Q8IUH4 622 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 FAM98AQ8NCA5 519 aaKnown RBP17.48■□□□□ 0.39
COL27A1-201ENST00000356083 MROH8Q9H579 483 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 C8orf4Q9NR00 106 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 MGAT4AQ9UM21 535 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 CCNB2O95067 398 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 DPEP1P16444 411 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 ITGA1P56199 1179 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 LSM3P62310 102 aaKnown RBP17.48■□□□□ 0.39
COL27A1-201ENST00000356083 PFKFB4Q16877 469 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 C4orf46Q504U0 113 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 UBA2Q9UBT2 640 aaPredicted RBP17.48■□□□□ 0.39
COL27A1-201ENST00000356083 ZNF214Q9UL59 606 aaPredicted RBP17.48■□□□□ 0.39
COL27A1-201ENST00000356083 A0A096LPK6 155 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 FAM205CA6NFA0 338 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 RSL1D1O76021 490 aaKnown RBP17.48■□□□□ 0.39
COL27A1-201ENST00000356083 F9P00740 461 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 RENBPP51606 427 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 RBM43Q6ZSC3 357 aaKnown RBP17.48■□□□□ 0.39
COL27A1-201ENST00000356083 ATCAYQ86WG3 371 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 FAM81AQ8TBF8 368 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 TOP1MTQ969P6 601 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 ZIM3Q96PE6 472 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 EPB41L4AQ9HCS5 686 aaPredicted RBP17.48■□□□□ 0.39
COL27A1-201ENST00000356083 HMG20AQ9NP66 347 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 DNMT3LQ9UJW3 386 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 GIT1Q9Y2X7 761 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 TMEM2Q9UHN6 1383 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 IKBKEQ14164 716 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 MYBPC3Q14896 1274 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 CYP2A13Q16696 494 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 FAM91A1Q658Y4 838 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 MTDHQ86UE4 582 aaKnown RBP17.48■□□□□ 0.39
COL27A1-201ENST00000356083 XPNPEP3Q9NQH7 507 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 TBC1D24Q9ULP9 559 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 PSEN2P49810 448 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms