RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ETNK2Q9NVF9 386 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 TNFSF13BQ9Y275 285 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 N6AMT1Q9Y5N5 214 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 SLC15A5A6NIM6 579 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 NEPROQ6NW34 567 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 ZCCHC23Q6ZST2 131 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 DENND1CQ8IV53 801 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 OR8H2Q8N162 312 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 ASB2Q96Q27 587 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 MLPHQ9BV36 600 aaPredicted RBP18.3■□□□□ 0.52
COL18A1-202ENST00000355480 MRPS26Q9BYN8 205 aaKnown RBP18.3■□□□□ 0.52
COL18A1-202ENST00000355480 CCDC167Q9P0B6 97 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 NBNO60934 754 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 PFKPQ01813 784 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 CREMQ03060 361 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 HSPA14Q0VDF9 509 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 TRMT5Q32P41 509 aaKnown RBP18.3■□□□□ 0.52
COL18A1-202ENST00000355480 KATNAL2Q8IYT4 538 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 PROX1Q92786 737 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 ASB8Q9H765 288 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 DNAJC18Q9H819 358 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 CDH9Q9ULB4 789 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 PSMB4P28070 264 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 OXNAD1Q96HP4 312 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-202ENST00000355480 RNF145Q96MT1 663 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 SYNPO2Q9UMS6 1093 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 ZSCAN5CA6NGD5 496 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-202ENST00000355480 SMIM22K7EJ46 135 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 FCHO1O14526 889 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 NTSP30990 170 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 CYP2C18P33260 490 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 CDK7P50613 346 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 CSNK2BP67870 215 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 SLC45A4Q5BKX6 768 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 LLGL2Q6P1M3 1020 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 C1orf186Q6ZWK4 172 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 PSTKQ8IV42 348 aaKnown RBP18.29■□□□□ 0.52
COL18A1-202ENST00000355480 FIBCD1Q8N539 461 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 QRFPRQ96P65 431 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 KLHL3Q9UH77 587 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 PCDHGA4Q9Y5G9 962 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 A0A087X0B3 334 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 ZNF862O60290 1169 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 OR6A2O95222 327 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 SERPINA13PQ6UXR4 307 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 FAM183BPQ6ZVS7 135 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 TMC3Q7Z5M5 1100 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 C18orf25Q96B23 403 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-202ENST00000355480 RSPH9Q9H1X1 276 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-202ENST00000355480 RAD21L1Q9H4I0 556 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 SERHL2Q9H4I8 314 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 SERHLQ9NQF3 203 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 ZC3H13Q5T200 1668 aaKnown RBP18.29■□□□□ 0.52
COL18A1-202ENST00000355480 RXRGP48443 463 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 LPPQ93052 612 aa18.29■□□□□ 0.52
COL18A1-202ENST00000355480 TRDMT1O14717 391 aaKnown RBP18.28■□□□□ 0.52
COL18A1-202ENST00000355480 HS6ST1O60243 411 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 TBL1XO60907 577 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 KRT75O95678 551 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 KRR1Q13601 381 aaKnown RBP18.28■□□□□ 0.52
COL18A1-202ENST00000355480 PCID2Q5JVF3 399 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 RAET1GQ6H3X3 334 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 C19orf18Q8NEA5 215 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 UGT2B28Q9BY64 529 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 IL22Q9GZX6 179 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 PRDM16Q9HAZ2 1276 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 CHST7Q9NS84 486 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 KLQ9UEF7 1012 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 ATP6V1HQ9UI12 483 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 TNPO3Q9Y5L0 923 aaKnown RBP18.28■□□□□ 0.52
COL18A1-202ENST00000355480 LDLRP01130 860 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 NFKB1P19838 968 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 RAB14P61106 215 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 IRF8Q02556 426 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 PPP3CAQ08209 521 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 CNGA2Q16280 664 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 KRT77Q7Z794 578 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 TMPRSS6Q8IU80 811 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 TERB1Q8NA31 727 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 OR52K1Q8NGK4 314 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 ACTRT2Q8TDY3 377 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 FHDC1Q9C0D6 1143 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-202ENST00000355480 KLHL1Q9NR64 748 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 IL1RAPL1Q9NZN1 696 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 TRIM24O15164 1050 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 BUD23O43709 281 aaKnown RBP18.28■□□□□ 0.52
COL18A1-202ENST00000355480 ANXA5P08758 320 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 TKTP29401 623 aaKnown RBP18.28■□□□□ 0.52
COL18A1-202ENST00000355480 CHKAP35790 457 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 MAGEA10P43363 369 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-202ENST00000355480 CCDC92Q53HC0 331 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-202ENST00000355480 SIGLEC16A6NMB1 481 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 CASP7P55210 303 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 INAQ16352 499 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 NPNTQ6UXI9 565 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 GPR142Q7Z601 462 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 RNF148Q8N7C7 305 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 DNAJC1Q96KC8 554 aaKnown RBP18.28■□□□□ 0.52
COL18A1-202ENST00000355480 TM6SF2Q9BZW4 377 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 ALG9Q9H6U8 611 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms