RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 MAK16Q9BXY0 300 aaKnown RBP22.68■■□□□ 1.22
SHMT1-203ENST00000354098 SLCO3A1Q9UIG8 710 aa22.68■■□□□ 1.22
SHMT1-203ENST00000354098 ACTL7AQ9Y615 435 aa22.68■■□□□ 1.22
SHMT1-203ENST00000354098 ADAM23O75077 832 aa22.67■■□□□ 1.22
SHMT1-203ENST00000354098 MT-CO1P00395 513 aa22.67■■□□□ 1.22
SHMT1-203ENST00000354098 IL12RB1P42701 662 aa22.67■■□□□ 1.22
SHMT1-203ENST00000354098 PAPOLAP51003 745 aaKnown RBP22.67■■□□□ 1.22
SHMT1-203ENST00000354098 PARP15Q460N3 678 aa22.67■■□□□ 1.22
SHMT1-203ENST00000354098 TFDP3Q5H9I0 405 aa22.67■■□□□ 1.22
SHMT1-203ENST00000354098 KAZNQ674X7 775 aa22.67■■□□□ 1.22
SHMT1-203ENST00000354098 ZNF354CQ86Y25 554 aa22.67■■□□□ 1.22
SHMT1-203ENST00000354098 LZTR1Q8N653 840 aa22.67■■□□□ 1.22
SHMT1-203ENST00000354098 PLD5Q8N7P1 536 aa22.67■■□□□ 1.22
SHMT1-203ENST00000354098 KCNV2Q8TDN2 545 aa22.67■■□□□ 1.22
SHMT1-203ENST00000354098 HERPUD2Q9BSE4 406 aa22.67■■□□□ 1.22
SHMT1-203ENST00000354098 C2orf49Q9BVC5 232 aaPredicted RBP22.67■■□□□ 1.22
SHMT1-203ENST00000354098 hCG_1818297A0A087WSY0 165 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 PRR33A8MZF0 331 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 SGK1O00141 431 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 DFFAO00273 331 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 MFSD11O43934 449 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 MAP3K6O95382 1288 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 ASLP04424 464 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 DYNLT1P63172 113 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 ARF5P84085 180 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 SULT2A1Q06520 285 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 SERINC3Q13530 473 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 PAFAH1B3Q15102 231 aaKnown RBP22.66■■□□□ 1.22
SHMT1-203ENST00000354098 TMEM31Q5JXX7 168 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 SLC9A4Q6AI14 798 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 LEKR1Q6ZMV7 388 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 ARHGAP36Q6ZRI8 547 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 SLC35F6Q8N357 371 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 ZNF366Q8N895 744 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 CCDC26Q8TAB7 109 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 ACDQ96AP0 544 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 ERLEC1Q96DZ1 483 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 HEMGNQ9BXL5 484 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 TLR10Q9BXR5 811 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 STON1Q9Y6Q2 735 aa22.66■■□□□ 1.22
SHMT1-203ENST00000354098 GOLGA6L9A6NEM1 432 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 CHURC1-FNTBB4DL54 471 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 KDELR3O43731 214 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 KIF5CO60282 957 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 ETFBP38117 255 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 GBE1Q04446 702 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 SLC10A2Q12908 348 aaPredicted RBP22.65■■□□□ 1.22
SHMT1-203ENST00000354098 RPS6KA1Q15418 735 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 FNDC3BQ53EP0 1204 aaKnown RBP22.65■■□□□ 1.22
SHMT1-203ENST00000354098 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.65■■□□□ 1.22
SHMT1-203ENST00000354098 C1QTNF1Q9BXJ1 281 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 KCND1Q9NSA2 647 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 CHD5Q8TDI0 1954 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 K7ERQ8 282 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 ENC1O14682 589 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 APOL1O14791 398 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 HLA-EP13747 358 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 AVPR2P30518 371 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 NTSR1P30989 418 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 SERPINB6P35237 376 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 NPNTQ6UXI9 565 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 TMEM245Q9H330 911 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 MTG2Q9H4K7 406 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.65■■□□□ 1.22
SHMT1-203ENST00000354098 RAD54BQ9Y620 910 aa22.65■■□□□ 1.22
SHMT1-203ENST00000354098 ARHGAP42A6NI28 874 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 J3KR12 359 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 CST8O60676 142 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 CD160O95971 181 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 SRPRAP08240 638 aaKnown RBP22.64■■□□□ 1.21
SHMT1-203ENST00000354098 PRKCHP24723 683 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 COPS2P61201 443 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 ENPP2Q13822 863 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 PPP2R5EQ16537 467 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 SERPINA13PQ6UXR4 307 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 SPEM1Q8N4L4 309 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 LRRN4Q8WUT4 740 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 DTLQ9NZJ0 730 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 SAE1Q9UBE0 346 aaPredicted RBP22.64■■□□□ 1.21
SHMT1-203ENST00000354098 SLC25A13Q9UJS0 675 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 MMP17Q9ULZ9 603 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 HPCAL4Q9UM19 191 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 MUC22E2RYF6 1773 aaPredicted RBP22.64■■□□□ 1.21
SHMT1-203ENST00000354098 NUP205Q92621 2012 aa22.64■■□□□ 1.21
SHMT1-203ENST00000354098 ZDBF2Q9HCK1 2354 aa22.63■■□□□ 1.21
SHMT1-203ENST00000354098 TTC34A8MYJ7 566 aa22.63■■□□□ 1.21
SHMT1-203ENST00000354098 SMAD6O43541 496 aaKnown RBP22.63■■□□□ 1.21
SHMT1-203ENST00000354098 MAGEA9P43362 315 aa22.63■■□□□ 1.21
SHMT1-203ENST00000354098 ST8SIA6P61647 398 aa22.63■■□□□ 1.21
SHMT1-203ENST00000354098 HS1BP3Q53T59 392 aa22.63■■□□□ 1.21
SHMT1-203ENST00000354098 TMEM92Q6UXU6 159 aa22.63■■□□□ 1.21
SHMT1-203ENST00000354098 TRMT11Q7Z4G4 463 aaKnown RBP22.63■■□□□ 1.21
SHMT1-203ENST00000354098 TRIM44Q96DX7 344 aaPredicted RBP22.63■■□□□ 1.21
SHMT1-203ENST00000354098 GABRG3Q99928 467 aa22.63■■□□□ 1.21
SHMT1-203ENST00000354098 OSBPL8Q9BZF1 889 aa22.63■■□□□ 1.21
SHMT1-203ENST00000354098 HS3ST2Q9Y278 367 aa22.63■■□□□ 1.21
SHMT1-203ENST00000354098 HEY1Q9Y5J3 304 aa22.63■■□□□ 1.21
SHMT1-203ENST00000354098 MYO18AQ92614 2054 aaKnown RBP22.62■■□□□ 1.21
SHMT1-203ENST00000354098 NPC1O15118 1278 aa22.62■■□□□ 1.21
SHMT1-203ENST00000354098 ATG13O75143 517 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms