RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 PCM1Q15154 2024 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 C3orf70A6NLC5 250 aaPredicted RBP13.48□□□□□ -0.25
IFT88-202ENST00000351808 WDR64B1ANS9 1081 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 AP3B1O00203 1094 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 TPP1O14773 563 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 SNPHO15079 494 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 PHGDHO43175 533 aaKnown RBP13.48□□□□□ -0.25
IFT88-202ENST00000351808 IDH3BO43837 385 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 TMCC2O75069 709 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 GLRA3O75311 464 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 ALDOAP04075 364 aaKnown RBP13.48□□□□□ -0.25
IFT88-202ENST00000351808 DDX5P17844 614 aaKnown RBP13.48□□□□□ -0.25
IFT88-202ENST00000351808 ZNF76P36508 570 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 P2RX3P56373 397 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 RACK1P63244 317 aaKnown RBP13.48□□□□□ -0.25
IFT88-202ENST00000351808 SNRNP35Q16560 246 aaKnown RBP13.48□□□□□ -0.25
IFT88-202ENST00000351808 SLC36A3Q495N2 470 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 PPM1JQ5JR12 505 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 LRRC38Q5VT99 294 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 DCUN1D2Q6PH85 259 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 NAPRTQ6XQN6 538 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 SV2AQ7L0J3 742 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 DEPDC4Q8N2C3 294 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 ZCCHC7Q8N3Z6 543 aaKnown RBP13.48□□□□□ -0.25
IFT88-202ENST00000351808 ANKFN1Q8N957 763 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 DEPDC1BQ8WUY9 529 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 TXNDC15Q96J42 360 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 CNDP1Q96KN2 507 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 TCF12Q99081 682 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 EMILIN2Q9BXX0 1053 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 LHPPQ9H008 270 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 TMEM206Q9H813 350 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 TAF1P21675 1872 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 RNF103-CHMP3A0A140T963 221 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 E7ENX8 843 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 LEPRP48357 1165 aaKnown RBP13.47□□□□□ -0.25
IFT88-202ENST00000351808 NOVP48745 357 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 RHBDL3P58872 404 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 SMAD1Q15797 465 aaKnown RBP13.47□□□□□ -0.25
IFT88-202ENST00000351808 RSBN1LQ6PCB5 846 aaPredicted RBP13.47□□□□□ -0.25
IFT88-202ENST00000351808 KIAA0408Q6ZU52 694 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 UNC5BQ8IZJ1 945 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 TNS4Q8IZW8 715 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 MFSD2AQ8NA29 543 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 TDRD5Q8NAT2 981 aaKnown RBP13.47□□□□□ -0.25
IFT88-202ENST00000351808 TMC2Q8TDI7 906 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 CNDP2Q96KP4 475 aaKnown RBP13.47□□□□□ -0.25
IFT88-202ENST00000351808 ACCSQ96QU6 501 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 EFHD1Q9BUP0 239 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 MTRRQ9UBK8 725 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 PCDHB12Q9Y5F1 795 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 TOGARAM1Q9Y4F4 1720 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 PAPPAQ13219 1627 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 SEC14L2O76054 403 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 OSBPP22059 807 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 PSME3P61289 254 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 SMU1Q2TAY7 513 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 NXNQ6DKJ4 435 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 BBS12Q6ZW61 710 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 ZNF677Q86XU0 584 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 CAMK1DQ8IU85 385 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 ARMC8Q8IUR7 673 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 CANT1Q8WVQ1 401 aa13.47□□□□□ -0.25
IFT88-202ENST00000351808 CELF1Q92879 486 aaKnown RBP13.47□□□□□ -0.25
IFT88-202ENST00000351808 UHRF1Q96T88 793 aaPredicted RBP13.47□□□□□ -0.25
IFT88-202ENST00000351808 IFT80Q9P2H3 777 aaPredicted RBP13.47□□□□□ -0.25
IFT88-202ENST00000351808 FAM172BPA6NC97 362 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 BCAS1O75363 584 aaPredicted RBP13.46□□□□□ -0.25
IFT88-202ENST00000351808 CPNE6O95741 557 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 CRY1Q16526 586 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 PAGE2BQ5JRK9 111 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 DARS2Q6PI48 645 aaKnown RBP13.46□□□□□ -0.25
IFT88-202ENST00000351808 CAND1Q86VP6 1230 aaKnown RBP13.46□□□□□ -0.25
IFT88-202ENST00000351808 EPHX4Q8IUS5 362 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 PARP8Q8N3A8 854 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 WARS2Q9UGM6 360 aaKnown RBP13.46□□□□□ -0.25
IFT88-202ENST00000351808 TCRBV3S1A0A5B6 114 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 TCAF2A6NFQ2 919 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 SLC15A5A6NIM6 579 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 PAPSS1O43252 624 aaPredicted RBP13.46□□□□□ -0.25
IFT88-202ENST00000351808 SYNCRIPO60506 623 aaKnown RBP13.46□□□□□ -0.25
IFT88-202ENST00000351808 TPST1O60507 370 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 UGT2B4P06133 528 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 BMP2P12643 396 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 TAL1P17542 331 aaPredicted RBP13.46□□□□□ -0.25
IFT88-202ENST00000351808 ADORA2AP29274 412 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 NAMPTP43490 491 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 SERPINB9P50453 376 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 GNG2P59768 71 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 SNAP25P60880 206 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 PCSK7Q16549 785 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 STXBP5Q5T5C0 1151 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 NPNTQ6UXI9 565 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 TIFABQ6ZNK6 161 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 PHF13Q86YI8 300 aaPredicted RBP13.46□□□□□ -0.25
IFT88-202ENST00000351808 ABRAQ8N0Z2 381 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 TTC30BQ8N4P2 665 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 SPATA18Q8TC71 538 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 FIG4Q92562 907 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 COQ7Q99807 217 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms