RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 BTBD6Q96KE9 485 aa22.63■■□□□ 1.21
SNX3-202ENST00000349379 CCDC42Q96M95 316 aa22.63■■□□□ 1.21
SNX3-202ENST00000349379 FAM129BQ96TA1 746 aa22.63■■□□□ 1.21
SNX3-202ENST00000349379 HINFPQ9BQA5 517 aa22.63■■□□□ 1.21
SNX3-202ENST00000349379 UVRAGQ9P2Y5 699 aa22.63■■□□□ 1.21
SNX3-202ENST00000349379 FRYLO94915 3013 aa22.63■■□□□ 1.21
SNX3-202ENST00000349379 CREB3O43889 395 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 MT-CO1P00395 513 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 TMEM253P0C7T8 217 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 VAV1P15498 845 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 GLDCP23378 1020 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 IL1R2P27930 398 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 ETFBP38117 255 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 ARF5P84085 180 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 ELAVL3Q14576 367 aaKnown RBP22.62■■□□□ 1.21
SNX3-202ENST00000349379 PLA2G2CQ5R387 149 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 LPCAT2Q7L5N7 544 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 CACUL1Q86Y37 369 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 GPR161Q8N6U8 529 aaKnown RBP22.62■■□□□ 1.21
SNX3-202ENST00000349379 ZNF564Q8TBZ8 553 aaPredicted RBP22.62■■□□□ 1.21
SNX3-202ENST00000349379 CTNNBL1Q8WYA6 563 aaPredicted RBP22.62■■□□□ 1.21
SNX3-202ENST00000349379 ARHGEF2Q92974 986 aaKnown RBP22.62■■□□□ 1.21
SNX3-202ENST00000349379 MAGEH1Q9H213 219 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 ARRDC1-AS1Q9H2J1 176 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 DHX35Q9H5Z1 703 aaKnown RBP22.62■■□□□ 1.21
SNX3-202ENST00000349379 NOL6Q9H6R4 1146 aaKnown RBP22.62■■□□□ 1.21
SNX3-202ENST00000349379 ATP13A1Q9HD20 1204 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 SPTLC3Q9NUV7 552 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 WSB2Q9NYS7 404 aaPredicted RBP22.62■■□□□ 1.21
SNX3-202ENST00000349379 DNAI1Q9UI46 699 aa22.62■■□□□ 1.21
SNX3-202ENST00000349379 BCLAF3A2AJT9 711 aaKnown RBP22.61■■□□□ 1.21
SNX3-202ENST00000349379 FGF10O15520 208 aaPredicted RBP22.61■■□□□ 1.21
SNX3-202ENST00000349379 TCF4P15884 667 aa22.61■■□□□ 1.21
SNX3-202ENST00000349379 CD6P30203 668 aa22.61■■□□□ 1.21
SNX3-202ENST00000349379 OXTRP30559 389 aa22.61■■□□□ 1.21
SNX3-202ENST00000349379 ACVRL1P37023 503 aa22.61■■□□□ 1.21
SNX3-202ENST00000349379 CLCN6P51797 869 aa22.61■■□□□ 1.21
SNX3-202ENST00000349379 SPEM2Q0P670 501 aa22.61■■□□□ 1.21
SNX3-202ENST00000349379 DLG2Q15700 870 aa22.61■■□□□ 1.21
SNX3-202ENST00000349379 KCTD15Q96SI1 283 aaPredicted RBP22.61■■□□□ 1.21
SNX3-202ENST00000349379 CATSPERBQ9H7T0 1116 aa22.61■■□□□ 1.21
SNX3-202ENST00000349379 SCML1Q9UN30 329 aa22.61■■□□□ 1.21
SNX3-202ENST00000349379 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.6■■□□□ 1.21
SNX3-202ENST00000349379 MYO1FO00160 1098 aa22.6■■□□□ 1.21
SNX3-202ENST00000349379 MAP3K13O43283 966 aa22.6■■□□□ 1.21
SNX3-202ENST00000349379 RAMP2O60895 175 aa22.6■■□□□ 1.21
SNX3-202ENST00000349379 CD160O95971 181 aa22.6■■□□□ 1.21
SNX3-202ENST00000349379 ACADMP11310 421 aa22.6■■□□□ 1.21
SNX3-202ENST00000349379 FECHP22830 423 aa22.6■■□□□ 1.21
SNX3-202ENST00000349379 ZNF135P52742 658 aaPredicted RBP22.6■■□□□ 1.21
SNX3-202ENST00000349379 TPI1P60174 286 aa22.6■■□□□ 1.21
SNX3-202ENST00000349379 RPL6Q02878 288 aaKnown RBP22.6■■□□□ 1.21
SNX3-202ENST00000349379 SLC25A11Q02978 314 aaKnown RBP22.6■■□□□ 1.21
SNX3-202ENST00000349379 CSRP2Q16527 193 aa22.6■■□□□ 1.21
SNX3-202ENST00000349379 TMEFF1Q8IYR6 380 aa22.6■■□□□ 1.21
SNX3-202ENST00000349379 UMODL1-AS1Q8N2C9 162 aa22.6■■□□□ 1.21
SNX3-202ENST00000349379 STK40Q8N2I9 435 aa22.6■■□□□ 1.21
SNX3-202ENST00000349379 TOE1Q96GM8 510 aaKnown RBP22.6■■□□□ 1.21
SNX3-202ENST00000349379 ANP32EQ9BTT0 268 aa22.6■■□□□ 1.21
SNX3-202ENST00000349379 SEMA4GQ9NTN9 838 aa22.6■■□□□ 1.21
SNX3-202ENST00000349379 K7ERQ8 282 aa22.59■■□□□ 1.21
SNX3-202ENST00000349379 SMAD6O43541 496 aaKnown RBP22.59■■□□□ 1.21
SNX3-202ENST00000349379 DNTTP04053 509 aa22.59■■□□□ 1.21
SNX3-202ENST00000349379 MPLP40238 635 aa22.59■■□□□ 1.21
SNX3-202ENST00000349379 PTGER3P43115 390 aa22.59■■□□□ 1.21
SNX3-202ENST00000349379 SERPINH1P50454 418 aaKnown RBP22.59■■□□□ 1.21
SNX3-202ENST00000349379 YBEYP58557 167 aaPredicted RBP22.59■■□□□ 1.21
SNX3-202ENST00000349379 SLC20A2Q08357 652 aa22.59■■□□□ 1.21
SNX3-202ENST00000349379 CST6Q15828 149 aa22.59■■□□□ 1.21
SNX3-202ENST00000349379 DPYSL2Q16555 572 aa22.59■■□□□ 1.21
SNX3-202ENST00000349379 BOLA3Q53S33 107 aa22.59■■□□□ 1.21
SNX3-202ENST00000349379 PEAR1Q5VY43 1037 aaPredicted RBP22.59■■□□□ 1.21
SNX3-202ENST00000349379 RETSATQ6NUM9 610 aa22.59■■□□□ 1.21
SNX3-202ENST00000349379 LINGO4Q6UY18 593 aa22.59■■□□□ 1.21
SNX3-202ENST00000349379 SLC41A1Q8IVJ1 513 aa22.59■■□□□ 1.21
SNX3-202ENST00000349379 TEKT4Q8WW24 435 aa22.59■■□□□ 1.21
SNX3-202ENST00000349379 ZNF419Q96HQ0 510 aaPredicted RBP22.59■■□□□ 1.21
SNX3-202ENST00000349379 SPON2Q9BUD6 331 aa22.59■■□□□ 1.21
SNX3-202ENST00000349379 PABPC3Q9H361 631 aaKnown RBP22.59■■□□□ 1.21
SNX3-202ENST00000349379 CTTNBP2NLQ9P2B4 639 aa22.59■■□□□ 1.21
SNX3-202ENST00000349379 CBX4O00257 560 aa22.58■■□□□ 1.21
SNX3-202ENST00000349379 EEF2KO00418 725 aaKnown RBP22.58■■□□□ 1.21
SNX3-202ENST00000349379 ALOX15BO15296 676 aa22.58■■□□□ 1.21
SNX3-202ENST00000349379 RNASEH1O60930 286 aaKnown RBP22.58■■□□□ 1.21
SNX3-202ENST00000349379 ZNF821O75541 412 aaPredicted RBP22.58■■□□□ 1.21
SNX3-202ENST00000349379 LCA5LO95447 670 aa22.58■■□□□ 1.21
SNX3-202ENST00000349379 ZNF806P0C7X5 589 aa22.58■■□□□ 1.21
SNX3-202ENST00000349379 HCAR3P49019 387 aa22.58■■□□□ 1.21
SNX3-202ENST00000349379 DHPSP49366 369 aaPredicted RBP22.58■■□□□ 1.21
SNX3-202ENST00000349379 CREB5Q02930 508 aa22.58■■□□□ 1.21
SNX3-202ENST00000349379 POLD3Q15054 466 aaPredicted RBP22.58■■□□□ 1.21
SNX3-202ENST00000349379 TTC31Q49AM3 519 aaPredicted RBP22.58■■□□□ 1.21
SNX3-202ENST00000349379 IL31Q6EBC2 164 aa22.58■■□□□ 1.21
SNX3-202ENST00000349379 TXNRD3NBQ6F5E7 133 aa22.58■■□□□ 1.21
SNX3-202ENST00000349379 Q6ZVU0 165 aa22.58■■□□□ 1.21
SNX3-202ENST00000349379 USP30Q70CQ3 517 aa22.58■■□□□ 1.21
SNX3-202ENST00000349379 MMAAQ8IVH4 418 aaKnown RBP22.58■■□□□ 1.21
SNX3-202ENST00000349379 ATP11CQ8NB49 1132 aa22.58■■□□□ 1.21
SNX3-202ENST00000349379 PANX2Q96RD6 677 aa22.58■■□□□ 1.21
SNX3-202ENST00000349379 KLC2Q9H0B6 622 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms