RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 FNTAP49354 379 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 SCNN1BP51168 640 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 CLCN6P51797 869 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 GEMP55040 296 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 LMAN2Q12907 356 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 COL19A1Q14993 1142 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 FAM133BQ5BKY9 247 aaKnown RBP8.32□□□□□ -1.08
HMGCR-202ENST00000343975 TXNRD3NBQ6F5E7 133 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 Q6ZNB5 142 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 RNF135Q8IUD6 432 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 PLD5Q8N7P1 536 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 ADAMTS19Q8TE59 1207 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 RMDN1Q96DB5 314 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 HMCESQ96FZ2 354 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 AGAP3Q96P47 875 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 CARD6Q9BX69 1037 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 ARGLU1Q9NWB6 273 aaPredicted RBP8.32□□□□□ -1.08
HMGCR-202ENST00000343975 AAR2Q9Y312 384 aaKnown RBP8.32□□□□□ -1.08
HMGCR-202ENST00000343975 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.32□□□□□ -1.08
HMGCR-202ENST00000343975 KPNA3O00505 521 aaPredicted RBP8.32□□□□□ -1.08
HMGCR-202ENST00000343975 DCXO43602 365 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 OPHN1O60890 802 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 CD48P09326 243 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 TCF4P15884 667 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 CCNCP24863 283 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 SLC6A4P31645 630 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 PTPN7P35236 360 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 NUMBP49757 651 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 SEC13P55735 322 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 BCL2L1Q07817 233 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 DHX34Q14147 1143 aaKnown RBP8.32□□□□□ -1.08
HMGCR-202ENST00000343975 PON2Q15165 354 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 NYAP1Q6ZVC0 841 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 PCGF5Q86SE9 256 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 SIX5Q8N196 739 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 FAF2Q96CS3 445 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 ASIC4Q96FT7 647 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 FAM83CQ9BQN1 747 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 TRIM31Q9BZY9 425 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 WNT16Q9UBV4 365 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 DUSP12Q9UNI6 340 aa8.32□□□□□ -1.08
HMGCR-202ENST00000343975 A0A1W2PQ67 120 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 EFCAB8A8MWE9 144 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 KCNK1O00180 336 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 DDX3YO15523 660 aaKnown RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 ERLIN1O75477 346 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 DNTTP04053 509 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 PRNPP04156 253 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 TUBBP07437 444 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 SRPRAP08240 638 aaKnown RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 CCNB1P14635 433 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 TIE1P35590 1138 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 FDFT1P37268 417 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 POLR2LP62875 67 aaKnown RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 GBE1Q04446 702 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 ZP2Q05996 745 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 HNRNPDQ14103 355 aaKnown RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 LBRQ14739 615 aaKnown RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 PAFAH1B3Q15102 231 aaKnown RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 NADSYN1Q6IA69 706 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 KIAA1324Q6UXG2 1013 aaKnown RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 TAB3Q8N5C8 712 aaPredicted RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 OTUD6BQ8N6M0 293 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 PCDH20Q8N6Y1 951 aaKnown RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 FEM1AQ9BSK4 669 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 TM6SF2Q9BZW4 377 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 SLC39A8Q9C0K1 460 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 ATP13A3Q9H7F0 1226 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 SAMD15Q9P1V8 674 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 PTPRSQ13332 1948 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 WASH4PA8MWX3 477 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 ANHXE9PGG2 379 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 KRT14P02533 472 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 HOXD9P28356 352 aaPredicted RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 GARSP41250 739 aaKnown RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 PEX5P50542 639 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 TERF1P54274 439 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 ZNF33AQ06730 810 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 NOMO1Q15155 1222 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 CASC4Q6P4E1 433 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 CPNE8Q86YQ8 564 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 CCDC33Q8N5R6 958 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 COG1Q8WTW3 980 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 MS4A14Q96JA4 679 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 ADGRE3Q9BY15 652 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 TSPYL1Q9H0U9 437 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 STOML2Q9UJZ1 356 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 GBF1Q92538 1859 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 KIAA1671Q9BY89 1806 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 EDDM13A0A1B0GTR0 161 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 FAM187AA6NFU0 413 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 FAM72CH0Y354 149 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 RNF103O00237 685 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 PENKP01210 267 aaPredicted RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 HOXB2P14652 356 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 WASP42768 502 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 MRPS21P82921 87 aaKnown RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 LAMB3Q13751 1172 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 ARHGEF7Q14155 803 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 DLG2Q15700 870 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms