RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CEP19Q96LK0 163 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 TWNKQ96RR1 684 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 MTG1Q9BT17 334 aaPredicted RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 ZCWPW1Q9H0M4 648 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 POMKQ9H5K3 350 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 CAB39LQ9H9S4 337 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 VPS28Q9UK41 221 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 KCNH4Q9UQ05 1017 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 ZNF541Q9H0D2 1346 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 GOLGA4Q13439 2230 aaKnown RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 RHOAP61586 193 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 POU5F1Q01860 360 aaKnown RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 PCBP1Q15365 356 aaKnown RBP eCLIP7.31□□□□□ -1.24
VCAN-202ENST00000342785 NR6A1Q15406 480 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 C9orf57Q5W0N0 161 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 UGT3A1Q6NUS8 523 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 SEC14L1Q92503 715 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 SH3KBP1Q96B97 665 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 MCRS1Q96EZ8 462 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 TMEM169Q96HH4 297 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 WDR55Q9H6Y2 383 aaPredicted RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 ARHGEF4Q9NR80 690 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 MOSPD1Q9UJG1 213 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 NDUFAF1Q9Y375 327 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 TRPV2Q9Y5S1 764 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 PTCH2Q9Y6C5 1203 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 INPP4BO15327 924 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 KPNA6O60684 536 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 DAB1O75553 588 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 TRIM16O95361 564 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 YWHAQP27348 245 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 ARHGEF7Q14155 803 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 FAM182AQ5T1J6 154 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 SH3PXD2AQ5TCZ1 1133 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 DACT3Q96B18 629 aaPredicted RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 SERAC1Q96JX3 654 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 NMRK1Q9NWW6 199 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 MFSD11O43934 449 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 TBC1D4O60343 1298 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 PLIN3O60664 434 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 ITGALP20701 1170 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 FASP25445 335 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 OGDHQ02218 1023 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 MBTD1Q05BQ5 628 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 TTC7BQ86TV6 843 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 CRYGNQ8WXF5 182 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 NDRG1Q92597 394 aaKnown RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 TMEM79Q9BSE2 394 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 ALG9Q9H6U8 611 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 ATP13A1Q9HD20 1204 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 ABCC13Q9NSE7 274 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 TBC1D23Q9NUY8 699 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 CDH9Q9ULB4 789 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 EIF3LQ9Y262 564 aaKnown RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 HBS1LQ9Y450 684 aaKnown RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 ATP6AP2A0A1C7CYW4 349 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 RGSL1A5PLK6 1076 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 ATP6AP2O75787 350 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 WFS1O76024 890 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 CKMP06732 381 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 IFNA8P32881 189 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 CRHR1P34998 444 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 INPP1P49441 399 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 POLD3Q15054 466 aaPredicted RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 SLC39A12Q504Y0 691 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 TMEM192Q8IY95 271 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 SPATA6LQ8N4H0 392 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 PCSK9Q8NBP7 692 aaKnown RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 GANCQ8TET4 914 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 DDX1Q92499 740 aaKnown RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 DACH2Q96NX9 599 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 GMLQ99445 158 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 SEPHS2Q99611 448 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 STN1Q9H668 368 aaKnown RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 ARHGEF3Q9NR81 526 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 RCOR3Q9P2K3 495 aaPredicted RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 TFEBP19484 476 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 ZNF280AP59817 542 aaPredicted RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 SP2Q02086 613 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 CA9Q16790 459 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 TEX44Q53QW1 395 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 PPM1JQ5JR12 505 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 LRRC8BQ6P9F7 803 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 SNX31Q8N9S9 440 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 METTL6Q8TCB7 284 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 CD101Q93033 1021 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 PIF1Q9H611 641 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 MARCH2Q9P0N8 246 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 ZNF180Q9UJW8 692 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 RAD54BQ9Y620 910 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 M0R3G1 203 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 DPYSL4O14531 572 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 LTA4HP09960 611 aaKnown RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 HNRNPLP14866 589 aaKnown RBP eCLIP7.3□□□□□ -1.241e-9■■■■■ 31.5
VCAN-202ENST00000342785 ASPAP45381 313 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 FCGRTP55899 365 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 KHDC1Q4VXA5 237 aaKnown RBP7.3□□□□□ -1.24
VCAN-202ENST00000342785 CACHD1Q5VU97 1274 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 FAM171A1Q5VUB5 890 aa7.3□□□□□ -1.24
VCAN-202ENST00000342785 PYROXD2Q8N2H3 581 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms