RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 KCNJ11Q14654 390 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 SLC5A9Q2M3M2 681 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 C5orf22Q49AR2 442 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 SPDYCQ5MJ68 293 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 HP1BP3Q5SSJ5 553 aaPredicted RBP17.72■□□□□ 0.43
CLDN4-201ENST00000340958 IL31Q6EBC2 164 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 CCDC117Q8IWD4 279 aaPredicted RBP17.72■□□□□ 0.43
CLDN4-201ENST00000340958 ZBED8Q8IZ13 594 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.72■□□□□ 0.43
CLDN4-201ENST00000340958 SH3RF2Q8TEC5 729 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 ING5Q8WYH8 240 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 PABPC5Q96DU9 382 aaKnown RBP17.72■□□□□ 0.43
CLDN4-201ENST00000340958 PRICKLE1Q96MT3 831 aaPredicted RBP17.72■□□□□ 0.43
CLDN4-201ENST00000340958 ZIM3Q96PE6 472 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 TXLNGYQ9BZA5 131 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 CDC42EP4Q9H3Q1 356 aaKnown RBP17.72■□□□□ 0.43
CLDN4-201ENST00000340958 SFXN1Q9H9B4 322 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 ARHGAP26Q9UNA1 814 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 ANAPC1Q9H1A4 1944 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 A0A1B0GVM2 712 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 TCAF2A6NFQ2 919 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 H0Y626 953 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 ZBTB24O43167 697 aaPredicted RBP17.72■□□□□ 0.43
CLDN4-201ENST00000340958 TMEM63AO94886 807 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 ACSL3O95573 720 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 MAGEA4P43358 317 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 YBEYP58557 167 aaPredicted RBP17.72■□□□□ 0.43
CLDN4-201ENST00000340958 MTM1Q13496 603 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 BBS9Q3SYG4 887 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 CARNMT1Q8N4J0 409 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 HJURPQ8NCD3 748 aaPredicted RBP17.72■□□□□ 0.43
CLDN4-201ENST00000340958 ADAMTS19Q8TE59 1207 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 DDI1Q8WTU0 396 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 SPON2Q9BUD6 331 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 NOL6Q9H6R4 1146 aaKnown RBP17.72■□□□□ 0.43
CLDN4-201ENST00000340958 RBM22Q9NW64 420 aaKnown RBP eCLIP17.72■□□□□ 0.43
CLDN4-201ENST00000340958 STOML2Q9UJZ1 356 aa17.72■□□□□ 0.43
CLDN4-201ENST00000340958 GOLGA6CA6NDK9 693 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 GOLGA6L10A6NI86 522 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 GOLGA6DP0CG33 693 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 NUMBP49757 651 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 RENBPP51606 427 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 SGSHP51688 502 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 GNA12Q03113 381 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 GAD2Q05329 585 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 SEMA5AQ13591 1074 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 UAP1Q16222 522 aaPredicted RBP17.71■□□□□ 0.43
CLDN4-201ENST00000340958 HTR3DQ70Z44 454 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 CHST9Q7L1S5 443 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 UHMK1Q8TAS1 419 aaKnown RBP17.71■□□□□ 0.43
CLDN4-201ENST00000340958 BHMTQ93088 406 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 ZNF707Q96C28 371 aaPredicted RBP17.71■□□□□ 0.43
CLDN4-201ENST00000340958 FRMD8Q9BZ67 464 aaPredicted RBP17.71■□□□□ 0.43
CLDN4-201ENST00000340958 MUC3BQ9H195 1237 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 TDP1Q9NUW8 608 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 DZANK1Q9NVP4 752 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 GOLGA6AQ9NYA3 693 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 IGSF9Q9P2J2 1179 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 ZMYM5Q9UJ78 669 aa17.71■□□□□ 0.43
CLDN4-201ENST00000340958 SOBPA7XYQ1 873 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 RIPK2O43353 540 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 OPA1O60313 960 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 POU2F2P09086 479 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 TPSB2P20231 275 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 ITKQ08881 620 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 SLC29A2Q14542 456 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 TPSAB1Q15661 275 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 KYNUQ16719 465 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 FNBP1LQ5T0N5 605 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 Q6ZNB5 142 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 BBS7Q8IWZ6 715 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 PDCD7Q8N8D1 485 aaKnown RBP17.7■□□□□ 0.42
CLDN4-201ENST00000340958 PYROXD1Q8WU10 500 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 C9orf72Q96LT7 481 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 TEKT5Q96M29 485 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 MAGEH1Q9H213 219 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 GBA3Q9H227 469 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 MOSPD3O75425 235 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 CYBBP04839 570 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 NFKB1P19838 968 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 IFI35P80217 286 aaPredicted RBP17.7■□□□□ 0.42
CLDN4-201ENST00000340958 TFF2Q03403 129 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 SERINC3Q13530 473 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 CDH18Q13634 790 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 PRSS36Q5K4E3 855 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 CEP85LQ5SZL2 805 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 RARS2Q5T160 578 aaKnown RBP17.7■□□□□ 0.42
CLDN4-201ENST00000340958 MARC1Q5VT66 337 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 TPGS1Q6ZTW0 290 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 SETD3Q86TU7 594 aaPredicted RBP17.7■□□□□ 0.42
CLDN4-201ENST00000340958 ANKMY2Q8IV38 441 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLDN4-201ENST00000340958 IQCKQ8N0W5 287 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 TDRD5Q8NAT2 981 aaKnown RBP17.7■□□□□ 0.42
CLDN4-201ENST00000340958 OR2W6PQ8NHA6 318 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 NUP205Q92621 2012 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 TTC25Q96NG3 672 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 APOL5Q9BWW9 433 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 THEGQ9P2T0 379 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 ZNF212Q9UDV6 495 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms