RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 NBPF19A0A087WUL8 3843 aa16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 SUV39H1O43463 412 aa16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 TNFSF15O95150 251 aa16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 YEATS4O95619 227 aa16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 CTSLP07711 333 aa16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 SETSIPP0DME0 302 aa16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 TACR2P21452 398 aa16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 DUSP3P51452 185 aaPredicted RBP16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 PDX1P52945 283 aa16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 C1QBPQ07021 282 aaKnown RBP16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 Q6ZVU0 165 aa16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 EFL1Q7Z2Z2 1120 aaKnown RBP16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 CCDC117Q8IWD4 279 aaPredicted RBP16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 UBR7Q8N806 425 aa16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 IRGQQ8WZA9 623 aa16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 ALG14Q96F25 216 aa16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 CCDC97Q96F63 343 aaPredicted RBP16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 PREBQ9HCU5 417 aa16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 KLF15Q9UIH9 416 aa16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 TLR6Q9Y2C9 796 aa16.84■□□□□ 0.29
NECTIN1-202ENST00000340882 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 NOBOXO60393 691 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 UTP20O75691 2785 aaKnown RBP16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 VDRP11473 427 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 GTF2H1P32780 548 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 PSMC2P35998 433 aaKnown RBP16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 NNMTP40261 264 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 MXI1P50539 228 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 ZNF177Q13360 481 aaPredicted RBP16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 TGIF1Q15583 401 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 NFIL3Q16649 462 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 FOXD4L6Q3SYB3 417 aaPredicted RBP16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 ACCSLQ4AC99 568 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 FAM46CQ5VWP2 391 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 SYPL2Q5VXT5 272 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 CXorf57Q6NSI4 855 aaKnown RBP16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 FOXD4L3Q6VB84 417 aaPredicted RBP16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 ATG14Q6ZNE5 492 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 Q6ZSR6 202 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 ABI3BPQ7Z7G0 1075 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 TAC4Q86UU9 113 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 ZNF548Q8NEK5 533 aaPredicted RBP16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 BMFQ96LC9 184 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 MIS12Q9H081 205 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 USP29Q9HBJ7 922 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 WDR70Q9NW82 654 aa16.83■□□□□ 0.28
NECTIN1-202ENST00000340882 NEMP2A6NFY4 417 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 MCF2LO15068 1137 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 ATP9BO43861 1147 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 BNIP3LO60238 219 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 FAM87AP0C7U9 286 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 HNRNPA2B1P22626 353 aaKnown RBP16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 PLK1P53350 603 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 ENPEPQ07075 957 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 CUL2Q13617 745 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 FZD2Q14332 565 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 DLG2Q15700 870 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 CBWD6Q4V339 395 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 ZC3H12AQ5D1E8 599 aaKnown RBP16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 CBWD3Q5JTY5 395 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 CBWD5Q5RIA9 395 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 TPRG1LQ5T0D9 272 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 FOXD4L5Q5VV16 416 aaPredicted RBP16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 SEL1L3Q68CR1 1132 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 LCLAT1Q6UWP7 414 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 RBM44Q6ZP01 1051 aaKnown RBP16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 DSG4Q86SJ6 1040 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 HORMAD1Q86X24 394 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 CHSY1Q86X52 802 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 CEP57L1Q8IYX8 460 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 CCAR2Q8N163 923 aaKnown RBP16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 FOXD4L4Q8WXT5 416 aaPredicted RBP16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 ZNF396Q96N95 335 aaPredicted RBP16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 DUSP23Q9BVJ7 150 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 GPR27Q9NS67 375 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 FAM13BQ9NYF5 915 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 ANKMY1Q9P2S6 941 aa16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 ATXN7L1Q9ULK2 861 aaPredicted RBP16.82■□□□□ 0.28
NECTIN1-202ENST00000340882 EME2A4GXA9 379 aaPredicted RBP16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 POM121BA6NF01 834 aa16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 C1QTNF3-AMACRE9PGA6 284 aa16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 AKT2P31751 481 aa16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 IRAK1P51617 712 aa16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 PITX1P78337 314 aaPredicted RBP16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 ADAM9Q13443 819 aa16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 FGL2Q14314 439 aa16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 DEFB133Q30KQ1 61 aa16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 ZCCHC8Q6NZY4 707 aaKnown RBP16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 ZNF574Q6ZN55 896 aaPredicted RBP16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 ARL14Q8N4G2 192 aa16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 WDR36Q8NI36 951 aaKnown RBP16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 IFT43Q96FT9 208 aa16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 SERPINB11Q96P15 392 aa16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 PRMT1Q99873 361 aaKnown RBP16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 LRRK2Q5S007 2527 aa16.81■□□□□ 0.28
NECTIN1-202ENST00000340882 RNF225M0QZC1 329 aaPredicted RBP16.8■□□□□ 0.28
NECTIN1-202ENST00000340882 RAD51BO15315 384 aa16.8■□□□□ 0.28
NECTIN1-202ENST00000340882 PRR29P0C7W0 189 aa16.8■□□□□ 0.28
NECTIN1-202ENST00000340882 ZNF18P17022 549 aa16.8■□□□□ 0.28
NECTIN1-202ENST00000340882 HNRNPKP61978 463 aaKnown RBP eCLIP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms