RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 RTP4Q96DX8 246 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 CIB1Q99828 191 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 FERMT1Q9BQL6 677 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 SIK2Q9H0K1 926 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 PRMT7Q9NVM4 692 aaPredicted RBP16.44■□□□□ 0.22
SCARB1-202ENST00000339570 PSMD13Q9UNM6 376 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 TDRKHQ9Y2W6 561 aaKnown RBP16.44■□□□□ 0.22
SCARB1-202ENST00000339570 VILLO15195 856 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 TFEBP19484 476 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 EPHX2P34913 555 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 SEPT6Q14141 434 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 TBC1D25Q3MII6 688 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 LRRC8BQ6P9F7 803 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 SPATA22Q8NHS9 363 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 VPS39Q96JC1 886 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 FTHL17Q9BXU8 183 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 CHST12Q9NRB3 414 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 PCDHB12Q9Y5F1 795 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 G3V2L1 256 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 BEST1O76090 585 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 JCHAINP01591 159 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 CXCR3P49682 368 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 SERPINB8P50452 374 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 MPP1Q00013 466 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 CELF3Q5SZQ8 465 aaKnown RBP16.43■□□□□ 0.22
SCARB1-202ENST00000339570 OTOP3Q7RTS5 596 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 SREK1Q8WXA9 508 aaKnown RBP16.43■□□□□ 0.22
SCARB1-202ENST00000339570 LRTOMTQ8WZ04 291 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 PHF21BQ96EK2 531 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 ELP3Q9H9T3 547 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 CYP3A43Q9HB55 503 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 V9GYQ6 96 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 IRF6O14896 467 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 MDM4O15151 490 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 PDAP1Q13442 181 aaKnown RBP16.43■□□□□ 0.22
SCARB1-202ENST00000339570 SNAPC2Q13487 334 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 DPYSL2Q16555 572 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 SH2D4BQ5SQS7 431 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 MTMR14Q8NCE2 650 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 SERPINI1Q99574 410 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 TXNRD2Q9NNW7 524 aa16.43■□□□□ 0.22
SCARB1-202ENST00000339570 KPNA7A9QM74 516 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 RNASEH2AO75792 299 aaKnown RBP16.42■□□□□ 0.22
SCARB1-202ENST00000339570 FBXO21O94952 628 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 THRAP10827 490 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 HNRNPDQ14103 355 aaKnown RBP16.42■□□□□ 0.22
SCARB1-202ENST00000339570 PTK2BQ14289 1009 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 MTX3Q5HYI7 312 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 CXorf38Q8TB03 319 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 RNF34Q969K3 372 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 RPL10LQ96L21 214 aaKnown RBP16.42■□□□□ 0.22
SCARB1-202ENST00000339570 RBBP8Q99708 897 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 CCT7Q99832 543 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 SNX25Q9H3E2 840 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 NXF3Q9H4D5 531 aaKnown RBP16.42■□□□□ 0.22
SCARB1-202ENST00000339570 PTPRFP10586 1907 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 MCM3APO60318 1980 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 ASLP04424 464 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 CKMT2P17540 419 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 NFKB1P19838 968 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 RPL5P46777 297 aaKnown RBP16.42■□□□□ 0.22
SCARB1-202ENST00000339570 OAZ1P54368 228 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 RWDD4Q6NW29 188 aaKnown RBP16.42■□□□□ 0.22
SCARB1-202ENST00000339570 PIGZQ86VD9 579 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 DGCR14Q96DF8 476 aaKnown RBP16.42■□□□□ 0.22
SCARB1-202ENST00000339570 ERLEC1Q96DZ1 483 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 Q9H521 79 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 LMCD1Q9NZU5 365 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 XPR1Q9UBH6 696 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 FAM149AA5PLN7 773 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 TKTP29401 623 aaKnown RBP16.42■□□□□ 0.22
SCARB1-202ENST00000339570 VGLL4Q14135 290 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 KRT80Q6KB66 452 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 NT5DC4Q86YG4 428 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 OR9I1Q8NGQ6 314 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 AFG1LQ8WV93 481 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 LENG1Q96BZ8 264 aaPredicted RBP16.42■□□□□ 0.22
SCARB1-202ENST00000339570 KLRG1Q96E93 195 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 RTKNQ9BST9 563 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 TRPC7Q9HCX4 862 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 MORF4L1Q9UBU8 362 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 DNAJB4Q9UDY4 337 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 STK39Q9UEW8 545 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 SORCS3Q9UPU3 1222 aa16.42■□□□□ 0.22
SCARB1-202ENST00000339570 LTBP4Q8N2S1 1624 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 RGSL1A5PLK6 1076 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 SAC3D1A6NKF1 404 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 C19orf81C9J6K1 198 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 CCL22O00626 93 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 VAPBO95292 243 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 MT-CYBP00156 380 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-202ENST00000339570 ERCC2P18074 760 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 UGT1A6P19224 532 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 CNTFP26441 200 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 MAP3K7CLP57077 242 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 PPP1R3AQ16821 1122 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 FBXO48Q5FWF7 155 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 LRRC8EQ6NSJ5 796 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 TIFABQ6ZNK6 161 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 CATSPER4Q7RTX7 472 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms