RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 OVGP1Q12889 678 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 CBLBQ13191 982 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 POU6F1Q14863 301 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 PCSK7Q16549 785 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 HSP90AA5PQ58FG0 334 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 C4orf22Q6V702 233 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 ZNF354CQ86Y25 554 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 C10orf67Q8IYJ2 551 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 RNF168Q8IYW5 571 aaPredicted RBP7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 CACNA2D3Q8IZS8 1091 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 LRRC39Q96DD0 335 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 PABPC5Q96DU9 382 aaKnown RBP7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 MAGEB18Q96M61 343 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 RPRD1AQ96P16 312 aaPredicted RBP7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 TMEM175Q9BSA9 504 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 ABCF3Q9NUQ8 709 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 ZNF358Q9NW07 568 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 SMPD4Q9NXE4 827 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 MTRRQ9UBK8 725 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 ZNF212Q9UDV6 495 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 IQANK1A0A1B0GTG1 560 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 ZCWPW2A0A1B0GU75 182 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 SRRM3A6NNA2 597 aaPredicted RBP7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 MATN3O15232 486 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 HOXA2O43364 376 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 ALDH1A2O94788 518 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 ALDOAP04075 364 aaKnown RBP7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 CLTBP09497 229 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 ZDHHC11BP0C7U3 371 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 ETV4P43268 484 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 NR1H3Q13133 447 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 TTC39BQ5VTQ0 682 aaPredicted RBP7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 AFMIDQ63HM1 303 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 DENND5AQ6IQ26 1287 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 C16orf46Q6P387 395 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 SPRED2Q7Z698 418 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 DENND1CQ8IV53 801 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 CCDC63Q8NA47 563 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 ZNF75CPQ92670 426 aaPredicted RBP7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 BHMTQ93088 406 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 ZNF669Q96BR6 464 aaPredicted RBP7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 C1orf74Q96LT6 269 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 RMDN2Q96LZ7 410 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 SRPK1Q96SB4 655 aaKnown RBP7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 FRMD8Q9BZ67 464 aaPredicted RBP7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 CATSPERBQ9H7T0 1116 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 PRDM16Q9HAZ2 1276 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 CASS4Q9NQ75 786 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 PCMTD2Q9NV79 361 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 CLIC5Q9NZA1 410 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 SLC2A6Q9UGQ3 507 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 DOCK4Q8N1I0 1966 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 ZNF840PA6NDX5 716 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 H7C4K7 107 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 MUSKO15146 869 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 COCHO43405 550 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 SUN1O94901 812 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 RTN3O95197 1032 aaPredicted RBP7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 SNRPAP09012 282 aaKnown RBP7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 IRF1P10914 325 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 MLNP12872 115 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 TSHRP16473 764 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 GLDCP23378 1020 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 IL9RQ01113 521 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 SLC18A2Q05940 514 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 NIPAL4Q0D2K0 466 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 ELAVL2Q12926 359 aaKnown RBP7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 BTG3Q14201 252 aaPredicted RBP7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 TRIP4Q15650 581 aaPredicted RBP7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 DLG2Q15700 870 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 HHATQ5VTY9 493 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 STEAP4Q687X5 459 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 CNKSR3Q6P9H4 555 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 C16orf59Q7L2K0 433 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 CMC1Q7Z7K0 106 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 PGBD5Q8N414 524 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 SLC25A41Q8N5S1 370 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 ZNF461Q8TAF7 563 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 TTC17Q96AE7 1141 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 ZNF689Q96CS4 500 aaPredicted RBP7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 SGSM3Q96HU1 749 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 BTN2A3PQ96KV6 586 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 SPATA17Q96L03 361 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 TSGA13Q96PP4 275 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 IL12RB2Q99665 862 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 FERMT1Q9BQL6 677 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 TRIM62Q9BVG3 475 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 PITPNM3Q9BZ71 974 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 NT5MQ9NPB1 228 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 EIF2B3Q9NR50 452 aaKnown RBP7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 NUMBLQ9Y6R0 609 aa7.54□□□□□ -1.2
SRFBP1-201ENST00000339397 CCL22O00626 93 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 SPAG6O75602 509 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 IGLV3-27P01718 113 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 PGAM1P18669 254 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 OR1E1P30953 314 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 CA8P35219 290 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 NEK3P51956 506 aa7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 WDR5P61964 334 aaKnown RBP7.53□□□□□ -1.2
SRFBP1-201ENST00000339397 ITKQ08881 620 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms