RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 CASC4Q6P4E1 433 aa17.5■□□□□ 0.39
ATAD3A-201ENST00000339113 GSDMBQ8TAX9 411 aa17.5■□□□□ 0.39
ATAD3A-201ENST00000339113 OXNAD1Q96HP4 312 aaPredicted RBP17.5■□□□□ 0.39
ATAD3A-201ENST00000339113 VAT1Q99536 393 aa17.5■□□□□ 0.39
ATAD3A-201ENST00000339113 CYP4F11Q9HBI6 524 aa17.5■□□□□ 0.39
ATAD3A-201ENST00000339113 ARHGEF3Q9NR81 526 aa17.5■□□□□ 0.39
ATAD3A-201ENST00000339113 PRKAG3Q9UGI9 489 aa17.5■□□□□ 0.39
ATAD3A-201ENST00000339113 ARL2BPQ9Y2Y0 163 aa17.5■□□□□ 0.39
ATAD3A-201ENST00000339113 LTBP2Q14767 1821 aa17.5■□□□□ 0.39
ATAD3A-201ENST00000339113 WASH4PA8MWX3 477 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 KRT4P19013 534 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 DNAJB2P25686 324 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 WDR4P57081 412 aaKnown RBP17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 NADSYN1Q6IA69 706 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 DNAJC5GQ8N7S2 189 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 SPATA22Q8NHS9 363 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 CKAP2Q8WWK9 683 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 APOL2Q9BQE5 337 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 ZYG11BQ9C0D3 744 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 NOP53Q9NZM5 478 aaKnown RBP17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 FAM47DPA6NHR8 397 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 GOLGA8RI6L899 631 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 ANP32DO95626 131 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 CSH1P0DML2 217 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 CSH2P0DML3 217 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 HSPA8P11142 646 aaKnown RBP17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 SKIV2L2P42285 1042 aaKnown RBP17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 ZNF33AQ06730 810 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 ACCSLQ4AC99 568 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 CES3Q6UWW8 571 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 C16orf59Q7L2K0 433 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 LRRC6Q86X45 466 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 CIR1Q86X95 450 aaPredicted RBP17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 DENND1AQ8TEH3 1009 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 DYDC1Q8WWB3 177 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 ZNF512Q96ME7 567 aaPredicted RBP17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 SMC6Q96SB8 1091 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 ECT2Q9H8V3 914 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 RXFP1Q9HBX9 757 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 MOCS1Q9NZB8 636 aa17.49■□□□□ 0.39
ATAD3A-201ENST00000339113 IGLV3-10A0A075B6K4 115 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 ZNF840PA6NDX5 716 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 MATN3O15232 486 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 TYROBPO43914 113 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 ZNF189O75820 626 aaPredicted RBP17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 INHBAP08476 426 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 RPA3P35244 121 aaPredicted RBP17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 STEAP4Q687X5 459 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 ITPRIPL1Q6GPH6 555 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 NSMCE1Q8WV22 266 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 IL12RB2Q99665 862 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 SPG21Q9NZD8 308 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 FAM159BA6NKW6 160 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 TCP11X1B4DZS4 312 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 PRPF4O43172 522 aaKnown RBP eCLIP17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 GSTA2P09210 222 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 RHOQP17081 205 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 LBX1P52954 281 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 RING1Q06587 406 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 SMAD1Q15797 465 aaKnown RBP17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 ASRGL1Q7L266 308 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 NECAB2Q7Z6G3 386 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 SLC26A11Q86WA9 606 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 CMTR2Q8IYT2 770 aaKnown RBP17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 UMODL1-AS1Q8N2C9 162 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 AGAP11Q8TF27 550 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 SERAC1Q96JX3 654 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 HERC2P3Q9BVR0 1158 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 C12orf65Q9H3J6 166 aaKnown RBP17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 CASS4Q9NQ75 786 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 FGFR1OP2Q9NVK5 253 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 TMEM248Q9NWD8 314 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 NKIRAS1Q9NYS0 192 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 SENP1Q9P0U3 644 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 SLC17A6Q9P2U8 582 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 PPARGC1AQ9UBK2 798 aaKnown RBP17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 ZNF212Q9UDV6 495 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 IKBKGQ9Y6K9 419 aa17.48■□□□□ 0.39
ATAD3A-201ENST00000339113 CACNG3O60359 315 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 MT-CYBP00156 380 aaPredicted RBP17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 ATP5C1P36542 298 aaKnown RBP17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 KCNJ2P63252 427 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 SPATA21Q7Z572 469 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 DDX53Q86TM3 631 aaKnown RBP17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 HMCESQ96FZ2 354 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 IL1RAPL1Q9NZN1 696 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 IPO11Q9UI26 975 aaKnown RBP17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 YIPF1Q9Y548 306 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 DRGXA6NNA5 263 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 J3KR12 359 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 COCHO43405 550 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 PEX11BO96011 259 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 LAG3P18627 525 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 NUMBP49757 651 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 CCNG1P51959 295 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 CCDC15Q0P6D6 951 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 SF3A3Q12874 501 aaKnown RBP eCLIP17.47■□□□□ 0.393e-6■■■■■ 32.1
ATAD3A-201ENST00000339113 SLC1A5Q15758 541 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 CERCAMQ5T4B2 595 aa17.47■□□□□ 0.39
ATAD3A-201ENST00000339113 TPGS2Q68CL5 300 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms