RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 GNA15P30679 374 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 CCR1P32246 355 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 PLK1P53350 603 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 CDK17Q00537 523 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 CENPCQ03188 943 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 OVGP1Q12889 678 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 EIF4EBP2Q13542 120 aaPredicted RBP16.08■□□□□ 0.16
LINC01116-202ENST00000339037 MORC3Q14149 939 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 TAF5Q15542 800 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 ACCSLQ4AC99 568 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 FBXL19Q6PCT2 694 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 SPATS2Q86XZ4 545 aaKnown RBP16.08■□□□□ 0.16
LINC01116-202ENST00000339037 ZNF606Q8WXB4 792 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 RNF34Q969K3 372 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 RPRD1AQ96P16 312 aaPredicted RBP16.08■□□□□ 0.16
LINC01116-202ENST00000339037 PPP1R9BQ96SB3 815 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 NRSN2Q9GZP1 204 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 UBE2TQ9NPD8 197 aaPredicted RBP16.08■□□□□ 0.16
LINC01116-202ENST00000339037 DDIT4Q9NX09 232 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 COX16Q9P0S2 106 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 ARHGAP20Q9P2F6 1191 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 SLC25A13Q9UJS0 675 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 SARDHQ9UL12 918 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.08■□□□□ 0.16
LINC01116-202ENST00000339037 ARID1BQ8NFD5 2236 aaPredicted RBP16.07■□□□□ 0.16
LINC01116-202ENST00000339037 ZNF462Q96JM2 2506 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 C1QTNF3-AMACRE9PGA6 284 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 RRP8O43159 456 aaKnown RBP16.07■□□□□ 0.16
LINC01116-202ENST00000339037 CKMT2P17540 419 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 ITPKBP27987 946 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 EIF2S3P41091 472 aaKnown RBP16.07■□□□□ 0.16
LINC01116-202ENST00000339037 CNTN1Q12860 1018 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 STAT4Q14765 748 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 RTP5Q14D33 572 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 TSR1Q2NL82 804 aaKnown RBP16.07■□□□□ 0.16
LINC01116-202ENST00000339037 POM121L1PQ3SYA9 428 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 SETMARQ53H47 684 aaPredicted RBP16.07■□□□□ 0.16
LINC01116-202ENST00000339037 AGBL4Q5VU57 503 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 FBXL22Q6P050 247 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 LRRC69Q6ZNQ3 347 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 KANSL1Q7Z3B3 1105 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 TRIM69Q86WT6 500 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 UBL7Q96S82 380 aaPredicted RBP16.07■□□□□ 0.16
LINC01116-202ENST00000339037 FEM1AQ9BSK4 669 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 ACP6Q9NPH0 428 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 NPDC1Q9NQX5 325 aaPredicted RBP16.07■□□□□ 0.16
LINC01116-202ENST00000339037 VPS28Q9UK41 221 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 PPM1HQ9ULR3 514 aa16.07■□□□□ 0.16
LINC01116-202ENST00000339037 PRAMEF26H0Y7S4 382 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 MCF2LO15068 1137 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 ALOX15BO15296 676 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 TLX3O43711 291 aaPredicted RBP16.06■□□□□ 0.16
LINC01116-202ENST00000339037 ATP9BO43861 1147 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 HSF2BPO75031 334 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 SDC3O75056 442 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 GLI1P08151 1106 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 ZNF18P17022 549 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 MARSP56192 900 aaKnown RBP16.06■□□□□ 0.16
LINC01116-202ENST00000339037 STX17P56962 302 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 Q6ZVU0 165 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 ENOSF1Q7L5Y1 443 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 BAP1Q92560 729 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 ALG14Q96F25 216 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 SLC2A13Q96QE2 648 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 PREBQ9HCU5 417 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 VANGL2Q9ULK5 521 aa16.06■□□□□ 0.16
LINC01116-202ENST00000339037 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.05■□□□□ 0.16
LINC01116-202ENST00000339037 BNIP3LO60238 219 aa16.05■□□□□ 0.16
LINC01116-202ENST00000339037 PAK1Q13153 545 aa16.05■□□□□ 0.16
LINC01116-202ENST00000339037 MTA1Q13330 715 aa16.05■□□□□ 0.16
LINC01116-202ENST00000339037 ZNF177Q13360 481 aaPredicted RBP16.05■□□□□ 0.16
LINC01116-202ENST00000339037 AUHQ13825 339 aaKnown RBP16.05■□□□□ 0.16
LINC01116-202ENST00000339037 DLG2Q15700 870 aa16.05■□□□□ 0.16
LINC01116-202ENST00000339037 PROX2Q3B8N5 592 aa16.05■□□□□ 0.16
LINC01116-202ENST00000339037 DEFB106AQ8N104 65 aa16.05■□□□□ 0.16
LINC01116-202ENST00000339037 OR52K2Q8NGK3 314 aa16.05■□□□□ 0.16
LINC01116-202ENST00000339037 RFFLQ8WZ73 363 aa16.05■□□□□ 0.16
LINC01116-202ENST00000339037 ASNSD1Q9NWL6 643 aa16.05■□□□□ 0.16
LINC01116-202ENST00000339037 CLCA2Q9UQC9 943 aa16.05■□□□□ 0.16
LINC01116-202ENST00000339037 CLDN11O75508 207 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 GRAP2O75791 330 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 GLDCP23378 1020 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 ACP1P24666 158 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 USP8P40818 1118 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 IRAK1P51617 712 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 NME3Q13232 169 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 ZNF211Q13398 564 aaPredicted RBP16.04■□□□□ 0.16
LINC01116-202ENST00000339037 EFHC1Q5JVL4 640 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 TRIM65Q6PJ69 517 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 SH2D3CQ8N5H7 860 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 SNIP1Q8TAD8 396 aaKnown RBP16.04■□□□□ 0.16
LINC01116-202ENST00000339037 KLHDC7BQ96G42 594 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 PPP1R13BQ96KQ4 1090 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 FAM81BQ96LP2 452 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 CPXM1Q96SM3 734 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 SRRTQ9BXP5 876 aaKnown RBP16.04■□□□□ 0.16
LINC01116-202ENST00000339037 MUC3BQ9H195 1237 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 CA5BQ9Y2D0 317 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 OR51B4Q9Y5P0 310 aa16.04■□□□□ 0.16
LINC01116-202ENST00000339037 HS3ST4Q9Y661 456 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms