RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 CARNMT1Q8N4J0 409 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 PDCD7Q8N8D1 485 aaKnown RBP15.01□□□□□ -0.01
CBX3-201ENST00000337620 UHMK1Q8TAS1 419 aaKnown RBP15.01□□□□□ -0.01
CBX3-201ENST00000337620 ITFG1Q8TB96 612 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 PABPC5Q96DU9 382 aaKnown RBP15.01□□□□□ -0.01
CBX3-201ENST00000337620 C9orf72Q96LT7 481 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 RBM22Q9NW64 420 aaKnown RBP eCLIP15.01□□□□□ -0.011e-7■■■□□ 18
CBX3-201ENST00000337620 IGSF9Q9P2J2 1179 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 REV3LO60673 3130 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 H0Y626 953 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 ACSL3O95573 720 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 RHOCP08134 193 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 NFKB1P19838 968 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 CD68P34810 354 aaPredicted RBP15.01□□□□□ -0.01
CBX3-201ENST00000337620 MAGEA6P43360 314 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 IFI35P80217 286 aaPredicted RBP15.01□□□□□ -0.01
CBX3-201ENST00000337620 GNA12Q03113 381 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 SLC29A2Q14542 456 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 ANO4Q32M45 955 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 BBS9Q3SYG4 887 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 DENND2CQ68D51 928 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 IL31Q6EBC2 164 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 PPP1R21Q6ZMI0 780 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 TPGS1Q6ZTW0 290 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 ZBED8Q8IZ13 594 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 CNTD1Q8N815 330 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 TDRD5Q8NAT2 981 aaKnown RBP15.01□□□□□ -0.01
CBX3-201ENST00000337620 HJURPQ8NCD3 748 aaPredicted RBP15.01□□□□□ -0.01
CBX3-201ENST00000337620 OR7D4Q8NG98 312 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 OR52K2Q8NGK3 314 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 OR2W6PQ8NHA6 318 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 DDI1Q8WTU0 396 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 ARHGEF2Q92974 986 aaKnown RBP15.01□□□□□ -0.01
CBX3-201ENST00000337620 SPON2Q9BUD6 331 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 MAGEH1Q9H213 219 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 EPB41L4BQ9H329 900 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 SOBPA7XYQ1 873 aa15□□□□□ -0.01
CBX3-201ENST00000337620 RIPK2O43353 540 aa15□□□□□ -0.01
CBX3-201ENST00000337620 AVILO75366 819 aa15□□□□□ -0.01
CBX3-201ENST00000337620 PRAMEF12O95522 483 aa15□□□□□ -0.01
CBX3-201ENST00000337620 TPSB2P20231 275 aa15□□□□□ -0.01
CBX3-201ENST00000337620 GPS2Q13227 327 aa15□□□□□ -0.01
CBX3-201ENST00000337620 FASTKD3Q14CZ7 662 aaKnown RBP15□□□□□ -0.01
CBX3-201ENST00000337620 TPSAB1Q15661 275 aa15□□□□□ -0.01
CBX3-201ENST00000337620 MSS51Q4VC12 460 aa15□□□□□ -0.01
CBX3-201ENST00000337620 TCEAL5Q5H9L2 206 aa15□□□□□ -0.01
CBX3-201ENST00000337620 SPDYCQ5MJ68 293 aa15□□□□□ -0.01
CBX3-201ENST00000337620 LEKR1Q6ZMV7 388 aa15□□□□□ -0.01
CBX3-201ENST00000337620 OTOP3Q7RTS5 596 aa15□□□□□ -0.01
CBX3-201ENST00000337620 ANKMY2Q8IV38 441 aa15□□□□□ -0.01
CBX3-201ENST00000337620 NSMCE1Q8WV22 266 aa15□□□□□ -0.01
CBX3-201ENST00000337620 IL12RB2Q99665 862 aa15□□□□□ -0.01
CBX3-201ENST00000337620 GBA3Q9H227 469 aa15□□□□□ -0.01
CBX3-201ENST00000337620 NSUN3Q9H649 340 aaKnown RBP15□□□□□ -0.01
CBX3-201ENST00000337620 DZANK1Q9NVP4 752 aa15□□□□□ -0.01
CBX3-201ENST00000337620 NINJ2Q9NZG7 142 aa15□□□□□ -0.01
CBX3-201ENST00000337620 E2F8A0AVK6 867 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 AGPSO00116 658 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 TTC4O95801 387 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 RENBPP51606 427 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 IL10RBQ08334 325 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 HYAL1Q12794 435 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 MARC1Q5VT66 337 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 POTEHQ6S545 545 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 SETD3Q86TU7 594 aaPredicted RBP14.99□□□□□ -0.01
CBX3-201ENST00000337620 ARID3BQ8IVW6 561 aaPredicted RBP14.99□□□□□ -0.01
CBX3-201ENST00000337620 FAM217AQ8IXS0 508 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 RIN3Q8TB24 985 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 MAML1Q92585 1016 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 ZNF419Q96HQ0 510 aaPredicted RBP14.99□□□□□ -0.01
CBX3-201ENST00000337620 SERPINB12Q96P63 405 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 MUC3BQ9H195 1237 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 TBC1D30Q9Y2I9 924 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 ILVBLA1L0T0 632 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 GFRA2O00451 464 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 ALOX15BO15296 676 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 LINC01565O15544 149 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 PEX11BO96011 259 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 GRIA1P42261 906 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 SARNPP82979 210 aaKnown RBP14.99□□□□□ -0.01
CBX3-201ENST00000337620 IFFO1Q0D2I5 559 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 HNRNPDQ14103 355 aaKnown RBP14.99□□□□□ -0.01
CBX3-201ENST00000337620 RNF219Q5W0B1 726 aaPredicted RBP14.99□□□□□ -0.01
CBX3-201ENST00000337620 CAND1Q86VP6 1230 aaKnown RBP14.99□□□□□ -0.01
CBX3-201ENST00000337620 RELL1Q8IUW5 271 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 CPXM2Q8N436 756 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 MCUQ8NE86 351 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 ZNF576Q9H609 170 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 PLK2Q9NYY3 685 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 UBP1Q9NZI7 540 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 ZMYM5Q9UJ78 669 aa14.99□□□□□ -0.01
CBX3-201ENST00000337620 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.99□□□□□ -0.01
CBX3-201ENST00000337620 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.98□□□□□ -0.01
CBX3-201ENST00000337620 GLP2RO95838 553 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 HLA-DQB2P05538 268 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 ETFBP38117 255 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 SLC10A7Q0GE19 358 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 CDH18Q13634 790 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 SPARCL1Q14515 664 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 PRPSAP1Q14558 356 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms