RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 MPP6Q9NZW5 540 aa11.52□□□□□ -0.57
C9orf85-201ENST00000334731 VPS28Q9UK41 221 aa11.52□□□□□ -0.57
C9orf85-201ENST00000334731 FZD4Q9ULV1 537 aa11.52□□□□□ -0.57
C9orf85-201ENST00000334731 PCDH15Q96QU1 1955 aa11.52□□□□□ -0.57
C9orf85-201ENST00000334731 CEP295Q9C0D2 2601 aa11.52□□□□□ -0.57
C9orf85-201ENST00000334731 A0A0D9SEW6 157 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 FAM47DPA6NHR8 397 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 LRRC72A6NJI9 287 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 E9PAM4 449 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 SRGAP2O75044 1071 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 TOP3BO95985 862 aaKnown RBP11.51□□□□□ -0.57
C9orf85-201ENST00000334731 ADH1BP00325 375 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 MT-CO1P00395 513 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 UNGP13051 313 aaPredicted RBP11.51□□□□□ -0.57
C9orf85-201ENST00000334731 ATP1A3P13637 1013 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 PSMD8P48556 350 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 SIM1P81133 766 aaPredicted RBP11.51□□□□□ -0.57
C9orf85-201ENST00000334731 ATP11AP98196 1134 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 TYRO3Q06418 890 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 FOXC1Q12948 553 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 PTP4A2Q12974 167 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 HNRNPDQ14103 355 aaKnown RBP11.51□□□□□ -0.57
C9orf85-201ENST00000334731 DLG2Q15700 870 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 CCDC14Q49A88 953 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 RAB6CQ53S08 254 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 LRSAM1Q6UWE0 723 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 TRIM72Q6ZMU5 477 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 SETD3Q86TU7 594 aaPredicted RBP11.51□□□□□ -0.57
C9orf85-201ENST00000334731 FAM131BQ86XD5 332 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 SH2D3CQ8N5H7 860 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 OR2T34Q8NGX1 318 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 RXFP2Q8WXD0 754 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 PSMB7Q99436 277 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 C11orf70Q9BRQ4 267 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 RAB6CQ9H0N0 254 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 MUC3BQ9H195 1237 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 EBF2Q9HAK2 575 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 METTL5Q9NRN9 209 aaKnown RBP11.51□□□□□ -0.57
C9orf85-201ENST00000334731 WDR70Q9NW82 654 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 TMEM63CQ9P1W3 806 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 SLC25A13Q9UJS0 675 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 SARDHQ9UL12 918 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 HS3ST2Q9Y278 367 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 ANKRD6Q9Y2G4 727 aa11.51□□□□□ -0.57
C9orf85-201ENST00000334731 ASCC3Q8N3C0 2202 aaKnown RBP11.5□□□□□ -0.57
C9orf85-201ENST00000334731 A0A1W2PPC4 97 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 C2CD4BA6NLJ0 364 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 MCF2LO15068 1137 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 SNAP91O60641 907 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 GJB6O95452 261 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 CER1O95813 267 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 RHOCP08134 193 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 ZNF883P0CG24 379 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 SPINK2P20155 84 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 DRD3P35462 400 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 GRIA4P48058 902 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 CCR5P51681 352 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 METAP1P53582 386 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 KRT83P78385 493 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 TEAD4Q15561 434 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 CLEC16AQ2KHT3 1053 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 KCNT1Q5JUK3 1230 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 C6orf118Q5T5N4 469 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.5□□□□□ -0.57
C9orf85-201ENST00000334731 DBX2Q6ZNG2 339 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 TFAP2DQ7Z6R9 452 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 PHF13Q86YI8 300 aaPredicted RBP11.5□□□□□ -0.57
C9orf85-201ENST00000334731 AOPEPQ8N6M6 819 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 OR14C36Q8NHC7 312 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 JOSD2Q8TAC2 188 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 CENPIQ92674 756 aaPredicted RBP11.5□□□□□ -0.57
C9orf85-201ENST00000334731 FAM131CQ96AQ9 280 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 ADAM22Q9P0K1 906 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 ZNF212Q9UDV6 495 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 VPS51Q9UID3 782 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 PPM1HQ9ULR3 514 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 FNDC3AQ9Y2H6 1198 aaKnown RBP11.5□□□□□ -0.57
C9orf85-201ENST00000334731 SNX11Q9Y5W9 270 aa11.5□□□□□ -0.57
C9orf85-201ENST00000334731 ILVBLA1L0T0 632 aa11.49□□□□□ -0.57
C9orf85-201ENST00000334731 K7ERQ8 282 aa11.49□□□□□ -0.57
C9orf85-201ENST00000334731 PLK4O00444 970 aa11.49□□□□□ -0.57
C9orf85-201ENST00000334731 KCNK3O14649 394 aa11.49□□□□□ -0.57
C9orf85-201ENST00000334731 SMAD6O43541 496 aaKnown RBP11.49□□□□□ -0.57
C9orf85-201ENST00000334731 CBFA2T3O75081 653 aa11.49□□□□□ -0.57
C9orf85-201ENST00000334731 KRT3P12035 628 aa11.49□□□□□ -0.57
C9orf85-201ENST00000334731 SRCP12931 536 aa11.49□□□□□ -0.57
C9orf85-201ENST00000334731 OR1E1P30953 314 aa11.49□□□□□ -0.57
C9orf85-201ENST00000334731 SDC4P31431 198 aa11.49□□□□□ -0.57
C9orf85-201ENST00000334731 RFC1P35251 1148 aaPredicted RBP11.49□□□□□ -0.57
C9orf85-201ENST00000334731 ADRA1BP35368 520 aa11.49□□□□□ -0.57
C9orf85-201ENST00000334731 PI4KAP42356 2102 aa11.49□□□□□ -0.57
C9orf85-201ENST00000334731 PTPN9P43378 593 aa11.49□□□□□ -0.57
C9orf85-201ENST00000334731 NSFP46459 744 aaKnown RBP11.49□□□□□ -0.57
C9orf85-201ENST00000334731 ADPRHP54922 357 aa11.49□□□□□ -0.57
C9orf85-201ENST00000334731 RACK1P63244 317 aaKnown RBP11.49□□□□□ -0.57
C9orf85-201ENST00000334731 TRIP6Q15654 476 aaKnown RBP11.49□□□□□ -0.57
C9orf85-201ENST00000334731 C15orf59Q2T9L4 293 aaPredicted RBP11.49□□□□□ -0.57
C9orf85-201ENST00000334731 GLIPR1L2Q4G1C9 344 aa11.49□□□□□ -0.57
C9orf85-201ENST00000334731 ANO6Q4KMQ2 910 aa11.49□□□□□ -0.57
C9orf85-201ENST00000334731 FAM46CQ5VWP2 391 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms