RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 TM9SF1O15321 606 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 CCL5P13501 91 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 CTSEP14091 401 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 CCND3P30281 292 aaPredicted RBP15.26■□□□□ 0.03
C9orf47-201ENST00000334490 NUDT2P50583 147 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 COPAP53621 1224 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 AQP5P55064 265 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 AASDHQ4L235 1098 aaPredicted RBP15.26■□□□□ 0.03
C9orf47-201ENST00000334490 SCARA3Q6AZY7 606 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 PATL1Q86TB9 770 aaKnown RBP15.26■□□□□ 0.03
C9orf47-201ENST00000334490 METTL3Q86U44 580 aaKnown RBP15.26■□□□□ 0.03
C9orf47-201ENST00000334490 FAM9CQ8IZT9 166 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 PCED1BQ96HM7 432 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 AGO1Q9UL18 857 aaKnown RBP15.26■□□□□ 0.03
C9orf47-201ENST00000334490 RWDD3Q9Y3V2 267 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 SERPINB5P36952 375 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 FAAP100Q0VG06 881 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 ILF2Q12905 390 aaKnown RBP15.26■□□□□ 0.03
C9orf47-201ENST00000334490 PRKAA1Q13131 559 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 INSCQ1MX18 579 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 PCDH18Q9HCL0 1135 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 C6orf203Q9P0P8 240 aaPredicted RBP15.26■□□□□ 0.03
C9orf47-201ENST00000334490 ZNF510Q9Y2H8 683 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 V9GYQ6 96 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 RNF225M0QZC1 329 aaPredicted RBP15.26■□□□□ 0.03
C9orf47-201ENST00000334490 DHX15O43143 795 aaKnown RBP15.26■□□□□ 0.03
C9orf47-201ENST00000334490 ZBTB14O43829 449 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 H2AFXP16104 143 aaPredicted RBP15.26■□□□□ 0.03
C9orf47-201ENST00000334490 HOXB8P17481 243 aaPredicted RBP15.26■□□□□ 0.03
C9orf47-201ENST00000334490 TGM3Q08188 693 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 HSPA14Q0VDF9 509 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 SLC35G1Q2M3R5 365 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 ZCWPW2Q504Y3 356 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 ANKS6Q68DC2 871 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 PMF1Q6P1K2 205 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 PRELID2Q8N945 189 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 OXCT2Q9BYC2 517 aaPredicted RBP15.26■□□□□ 0.03
C9orf47-201ENST00000334490 MYO9BQ13459 2157 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 CCT8L1PA6NM43 557 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 SLCO1B7G3V0H7 640 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 FGF19O95750 216 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 CYP1A1P04798 512 aaPredicted RBP15.25■□□□□ 0.03
C9orf47-201ENST00000334490 HOMEZQ8IX15 550 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 KIF2BQ8N4N8 673 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 ARHGAP26Q9UNA1 814 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 HNRNPCL2B2RXH8 293 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 PHGDHO43175 533 aaKnown RBP15.25■□□□□ 0.03
C9orf47-201ENST00000334490 TRIM13O60858 407 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 CNTN1Q12860 1018 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 GDF6Q6KF10 455 aaPredicted RBP15.25■□□□□ 0.03
C9orf47-201ENST00000334490 DAW1Q8N136 415 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 KLHL5Q96PQ7 755 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 TCF25Q9BQ70 676 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 DPEP3Q9H4B8 488 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 DEC1Q9P2X7 70 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 PCDHB9Q9Y5E1 797 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 C1orf232A0A0U1RR37 186 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 PDE2AO00408 941 aaPredicted RBP15.25■□□□□ 0.03
C9orf47-201ENST00000334490 CLDN11O75508 207 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 RPN2P04844 631 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 ADSSP30520 456 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 CORO1AP31146 461 aaKnown RBP15.25■□□□□ 0.03
C9orf47-201ENST00000334490 XYLT1Q86Y38 959 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 ECHDC2Q86YB7 292 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 CLEC4FQ8N1N0 589 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 SLC4A11Q8NBS3 891 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 TCP10LQ8TDR4 215 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 BPIFA1Q9NP55 256 aa15.25■□□□□ 0.03
C9orf47-201ENST00000334490 KIAA1522Q9P206 1035 aaPredicted RBP15.25■□□□□ 0.03
C9orf47-201ENST00000334490 NDUFS2O75306 463 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 DNAJC8O75937 253 aaPredicted RBP15.24■□□□□ 0.03
C9orf47-201ENST00000334490 CLTBP09497 229 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 TYMPP19971 482 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 PLK1P53350 603 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 AIF1P55008 147 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 LRRC36Q1X8D7 754 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 FUT11Q495W5 492 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 PRSS55Q6UWB4 352 aaPredicted RBP15.24■□□□□ 0.03
C9orf47-201ENST00000334490 MTSS1LQ765P7 747 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 ALLCQ8N6M5 410 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 CXorf38Q8TB03 319 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 TSEN34Q9BSV6 310 aaKnown RBP15.24■□□□□ 0.03
C9orf47-201ENST00000334490 TBC1D14Q9P2M4 693 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 MORF4L1Q9UBU8 362 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 STK39Q9UEW8 545 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 GPR1P46091 355 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 PKN2Q16513 984 aaKnown RBP15.24■□□□□ 0.03
C9orf47-201ENST00000334490 ZNF792Q3KQV3 632 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 RAET1GQ6H3X3 334 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 DQX1Q8TE96 717 aaKnown RBP15.24■□□□□ 0.03
C9orf47-201ENST00000334490 HNRNPABQ99729 332 aaKnown RBP15.24■□□□□ 0.03
C9orf47-201ENST00000334490 E9PBE3 544 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 KLHL41O60662 606 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 IL2P60568 153 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 ACTN3Q08043 901 aaPredicted RBP15.24■□□□□ 0.03
C9orf47-201ENST00000334490 TCEA2Q15560 299 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 FAM46CQ5VWP2 391 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 PLEKHA7Q6IQ23 1121 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 ZNF556Q9HAH1 456 aa15.24■□□□□ 0.03
C9orf47-201ENST00000334490 DMAC2Q9NW81 257 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms