RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 NLGN4YQ8NFZ3 816 aaPredicted RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 FIBINQ8TAL6 211 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 UBE2Q2Q8WVN8 375 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 DNAJB3Q8WWF6 145 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 WFDC12Q8WWY7 111 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 PIGTQ969N2 578 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 PPP1R13BQ96KQ4 1090 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 PRICKLE1Q96MT3 831 aaPredicted RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 JMJD8Q96S16 334 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 RAB11FIP5Q9BXF6 653 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 EDEM3Q9BZQ6 932 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 SEMA4CQ9C0C4 833 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 APMAPQ9HDC9 416 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 ADAP2Q9NPF8 381 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 AGPAT4Q9NRZ5 378 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 RGL1Q9NZL6 768 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 AKAP7Q9P0M2 348 aaPredicted RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 VPS4AQ9UN37 437 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 FNDC3AQ9Y2H6 1198 aaKnown RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 TESMINQ9Y4I5 508 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 SRPRBQ9Y5M8 271 aaKnown RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 CPQQ9Y646 472 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 TAF6LQ9Y6J9 622 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 USP9YO00507 2555 aaPredicted RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 POLQO75417 2590 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 PLECQ15149 4684 aaKnown RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 TRIP11Q15643 1979 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 ANKRD17O75179 2603 aaKnown RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 DYSFO75923 2080 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 TTC28Q96AY4 2481 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 A0A1W2PNU3 283 aaPredicted RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 VWC2LB2RUY7 222 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 J3QLI3 93 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 TGFB1I1O43294 461 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 ARHGEF9O43307 516 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 HCRTR2O43614 444 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 PPP1R11O60927 126 aaPredicted RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 KAT7O95251 611 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 LCA5LO95447 670 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 IBSPP21815 317 aaPredicted RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 KLRC1P26715 233 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 ARFIP1P53367 373 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 RAD23BP54727 409 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 AIF1P55008 147 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 GEMIN4P57678 1058 aaKnown RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 RBPJQ06330 500 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 INCA1Q0VD86 236 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 IFRD2Q12894 506 aaPredicted RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 FASTKQ14296 549 aaKnown RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 SF3A1Q15459 793 aaKnown RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 CCDC142Q17RM4 750 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 TAF1BQ53T94 588 aaPredicted RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 TMEM63BQ5T3F8 832 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 FAM102BQ5T8I3 360 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 FYB2Q5VWT5 728 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 ERICH6BQ5W0A0 696 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 SARM1Q6SZW1 724 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 G2E3Q7L622 706 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 HEATR3Q7Z4Q2 680 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 ZNF354CQ86Y25 554 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 SMYD4Q8IYR2 804 aaPredicted RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 RGL4Q8IZJ4 473 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 THEM5Q8N1Q8 247 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 CCDC148Q8NFR7 591 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 EVI5LQ96CN4 794 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 MTFMTQ96DP5 389 aaKnown RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 FAM81BQ96LP2 452 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 PPP1R16BQ96T49 567 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 HERPUD2Q9BSE4 406 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 ACE2Q9BYF1 805 aaPredicted RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 ELOVL4Q9GZR5 314 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 LRRN3Q9H3W5 708 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 FBXO44Q9H4M3 255 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 LUC7LQ9NQ29 371 aaKnown RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 HEBP1Q9NRV9 189 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 MCM9Q9NXL9 1143 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 NOP53Q9NZM5 478 aaKnown RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 RAI14Q9P0K7 980 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 PPARGC1AQ9UBK2 798 aaKnown RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 UBA2Q9UBT2 640 aaPredicted RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 SAP30BPQ9UHR5 308 aaKnown RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 ZNF580Q9UK33 172 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 ERVW-1Q9UQF0 538 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 HS3ST2Q9Y278 367 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 PPIAL4AQ9Y536 164 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 PCDHB11Q9Y5F2 797 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 COL4A3BPQ9Y5P4 624 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 PSAT1Q9Y617 370 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 ZFC3H1O60293 1989 aaKnown RBP1.63□□□□□ -2.15
LINC00643-201ENST00000334389 RYR3Q15413 4870 aa1.63□□□□□ -2.15
LINC00643-201ENST00000334389 A0A0A6YYK5 440 aaPredicted RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 SPTY2D1-AS1A0A0U1RR47 76 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 TTC26A0AVF1 554 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 A8MZ25 164 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 GOLGA6L6A8MZA4 724 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 H3BMH7 237 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 M0R2C6 588 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 O00370 1275 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 NOP56O00567 594 aaKnown RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 PSPNO60542 156 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms