RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 FCRL2Q96LA5 508 aaPredicted RBP15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 ABI2Q9NYB9 513 aaPredicted RBP15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 COPG2Q9UBF2 871 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 C15orf41Q9Y2V0 281 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 H0Y3Z8 333 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 DDHD2O94830 711 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 RPSAP08865 295 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 CCR1P32246 355 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 MAGEA12P43365 314 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 NPY2RP49146 381 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 SERPINB8P50452 374 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 PGGT1BP53609 377 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 CDH17Q12864 832 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 MPP3Q13368 585 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 ITGA7Q13683 1181 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 PRPSAP1Q14558 356 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 INSCQ1MX18 579 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 FBXO27Q8NI29 283 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 PIWIL2Q8TC59 973 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 UROC1Q96N76 676 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 NUDCD1Q96RS6 583 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 RNPEPL1Q9HAU8 725 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 MPP6Q9NZW5 540 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 SOX13Q9UN79 622 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 PATJQ8NI35 1801 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 A0A1W2PQH9 124 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 SERPINE1P05121 402 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 COG7P83436 770 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 ITGA9Q13797 1035 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 DBN1Q16643 649 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 FAM91A1Q658Y4 838 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 NAPEPLDQ6IQ20 393 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 C4orf50Q6ZRC1 276 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 RTN4RL1Q86UN2 441 aaPredicted RBP15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 IPMKQ8NFU5 416 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 ISL2Q96A47 359 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 HAPLN3Q96S86 360 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 SLC39A8Q9C0K1 460 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 SMOC2Q9H3U7 446 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 OSER1Q9NX31 292 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 ADAM28Q9UKQ2 775 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 MYO16Q9Y6X6 1858 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 A0A096LPK6 155 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 CYP2C18P33260 490 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 GPR15P49685 360 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 UBAP2LQ14157 1087 aaKnown RBP15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 BRMS1LQ5PSV4 323 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 ARTNQ5T4W7 220 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 MCUR1Q96AQ8 359 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 SORT1Q99523 831 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 TRIM62Q9BVG3 475 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 PNPOQ9NVS9 261 aa15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.14■□□□□ 0.01
CLCNKA-201ENST00000331433 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 MAGEB16A2A368 324 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 TMEM88BA6NKF7 163 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 MAFKO60675 156 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 RALBP11234 206 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 TYMPP19971 482 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 CCNCP24863 283 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 TUBP50607 506 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 KDSRQ06136 332 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 POU6F1Q14863 301 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 WASHC2DQ5SRD0 308 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 MANEALQ5VSG8 457 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 BEND5Q7L4P6 421 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 C14orf80Q86SX3 495 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 WDR75Q8IWA0 830 aaKnown RBP15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 TEX9Q8N6V9 391 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 URGCPQ8TCY9 931 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 VPS39Q96JC1 886 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 TSGA13Q96PP4 275 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 PCDHB8Q9UN66 801 aa15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 PRG3Q9Y2Y8 225 aaPredicted RBP15.13■□□□□ 0.01
CLCNKA-201ENST00000331433 PRR5-ARHGAP8B1AHC4 643 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 B2RBV5 119 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 CPA3P15088 417 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 SAT1P21673 171 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 ARHGAP8P85298 464 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 CDK18Q07002 472 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 FRG1Q14331 258 aaKnown RBP15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 DDR2Q16832 855 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 CLLU1OSQ5K130 101 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 MAVSQ7Z434 540 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 KDELC2Q7Z4H8 507 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 TBL1YQ9BQ87 522 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 ABT1Q9ULW3 272 aaKnown RBP15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 HS3ST4Q9Y661 456 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 CACNG3O60359 315 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 C2P06681 752 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 TPBGLP0DKB5 382 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 SKIP12755 728 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 HOXC13P31276 330 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 TM4SF4P48230 202 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 GLB1LQ6UWU2 654 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 LBHD1Q9BQE6 289 aaPredicted RBP15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 MCMBPQ9BTE3 642 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 FICDQ9BVA6 458 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 KIFC1Q9BW19 673 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 CCDC106Q9BWC9 280 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms