RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PCDHB13Q9Y5F0 798 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 USP3Q9Y6I4 520 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 ADGRG4Q8IZF6 3080 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 WIPF3A6NGB9 483 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 PRR19A6NJB7 356 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 D6RAR5 112 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 TPP1O14773 563 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 AQP9O43315 295 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 CLDN1O95832 211 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 DDAH2O95865 285 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 CSF2P04141 144 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 SRPRAP08240 638 aaKnown RBP15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 NME1P15531 152 aaKnown RBP15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 AKT2P31751 481 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 CCKBRP32239 447 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 ALCAMQ13740 583 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 KMT5BQ4FZB7 885 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 LACTB2Q53H82 288 aaPredicted RBP15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 MPP7Q5T2T1 576 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 AGBL4Q5VU57 503 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 SCARA5Q6ZMJ2 495 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 ABI3BPQ7Z7G0 1075 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 ZC3H18Q86VM9 953 aaKnown RBP15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 SLC35F3Q8IY50 421 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 CEP57L1Q8IYX8 460 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 CRYBG2Q8N1P7 616 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 GALNT11Q8NCW6 608 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 KLK6Q92876 244 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 GLMNQ92990 594 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 ABHD17AQ96GS6 310 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 CATSPER2Q96P56 530 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 IL12RB2Q99665 862 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 BOCQ9BWV1 1114 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 SDCBP2Q9H190 292 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 VRTNQ9H8Y1 702 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 PLSCR2Q9NRY7 297 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 FBN3Q75N90 2809 aa15.25■□□□□ 0.03
CTHRC1-201ENST00000330295 HIVEP3Q5T1R4 2406 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 POLR2DO15514 142 aaKnown RBP15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 TBL1XO60907 577 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 SLFN14P0C7P3 912 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 SLC6A4P31645 630 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 CTSOP43234 321 aaPredicted RBP15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 CLDN2P57739 230 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 CNTN1Q12860 1018 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 SHC4Q6S5L8 630 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 GCNT7Q6ZNI0 430 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 HEATR4Q86WZ0 1026 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 DCP2Q8IU60 420 aaKnown RBP15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 MFN1Q8IWA4 741 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 JPH3Q8WXH2 748 aaPredicted RBP15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 USP7Q93009 1102 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 MS4A3Q96HJ5 214 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 PPP1R13BQ96KQ4 1090 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 GFM1Q96RP9 751 aaKnown RBP15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 PANK4Q9NVE7 773 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 HMGXB4Q9UGU5 601 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 SLCO3A1Q9UIG8 710 aa15.24■□□□□ 0.03
CTHRC1-201ENST00000330295 CLSTN1O94985 981 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 LATS1O95835 1130 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 HNRNPA2B1P22626 353 aaKnown RBP15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 ETV5P41161 510 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 NDST1P52848 882 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 FZD2Q14332 565 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 ZNF667Q5HYK9 610 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 RESP18Q5W5W9 173 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 OR6B2Q6IFH4 312 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 Q6ZSR6 202 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 PTAR1Q7Z6K3 402 aaPredicted RBP15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 FIBINQ8TAL6 211 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 LMX1AQ8TE12 382 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 CCDC34Q96HJ3 373 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 TMEM74Q96NL1 305 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 SPAG5Q96R06 1193 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 OLFML3Q9NRN5 406 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 GPR27Q9NS67 375 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 USP25Q9UHP3 1055 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 SARDHQ9UL12 918 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 SDK2Q58EX2 2172 aa15.23■□□□□ 0.03
CTHRC1-201ENST00000330295 MTORP42345 2549 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 A0A1W2PQU0 124 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 GOLGA6L4A6NEF3 574 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 A6NNZ2 444 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 C9orf172C9J069 976 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 CMA1P23946 247 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 ATP1A2P50993 1020 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 TAS2R38P59533 333 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 ZNF284Q2VY69 593 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 ZNF699Q32M78 642 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 PIK3R6Q5UE93 754 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 RFWD3Q6PCD5 774 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 PARGQ86W56 976 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 FAM114A1Q8IWE2 563 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 ARHGAP18Q8N392 663 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 FAM174AQ8TBP5 190 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 ZNF516Q92618 1163 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 DNAJC19Q96DA6 116 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 FGFBP2Q9BYJ0 223 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 KIAA1586Q9HCI6 787 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms