RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 XPO7Q9UIA9 1087 aaKnown RBP16.88■□□□□ 0.29
PDLIM1-201ENST00000329399 LSM7Q9UK45 103 aaKnown RBP16.88■□□□□ 0.29
PDLIM1-201ENST00000329399 R4GN57 208 aa16.88■□□□□ 0.29
PDLIM1-201ENST00000329399 ZNF292O60281 2723 aa16.88■□□□□ 0.29
PDLIM1-201ENST00000329399 K7ESF4 209 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 GFRA2O00451 464 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 TSPAN3O60637 253 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 SEC31AO94979 1220 aaKnown RBP16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 CISD3P0C7P0 127 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 SLC2A3P11169 496 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 TYRP14679 529 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 TFE3P19532 575 aaPredicted RBP16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 DRD1P21728 446 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 ADRA1BP35368 520 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 PLA2G5P39877 138 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 TNNT3P45378 269 aaPredicted RBP16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 CXCR3P49682 368 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 SGSHP51688 502 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 GAD2Q05329 585 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 EIF4EBP2Q13542 120 aaPredicted RBP16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 LRRC32Q14392 662 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 MAMSTRQ6ZN01 415 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 SPEM1Q8N4L4 309 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 ART4Q93070 314 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 FCRL2Q96LA5 508 aaPredicted RBP16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 FMO2Q99518 471 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 BBS2Q9BXC9 721 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 DHX35Q9H5Z1 703 aaKnown RBP16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 FAM53CQ9NYF3 392 aa16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 R3HDM2Q9Y2K5 976 aaKnown RBP16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 HBS1LQ9Y450 684 aaKnown RBP16.87■□□□□ 0.29
PDLIM1-201ENST00000329399 A0A0A0MRY4 1105 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 KAT7O95251 611 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 MYBL2P10244 700 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 HSPA9P38646 679 aaKnown RBP16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 MAGEA9P43362 315 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 KCNJ1P48048 391 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 SNX1Q13596 522 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 SLMAPQ14BN4 828 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 C2orf27AQ580R0 203 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 CFAP58Q5T655 872 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 FYB2Q5VWT5 728 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 NADSYN1Q6IA69 706 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 ANKS1BQ7Z6G8 1248 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 FAM217AQ8IXS0 508 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 RPLP0P6Q8NHW5 317 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 ACTL9Q8TC94 416 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 PLD4Q96BZ4 506 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 SLC39A13Q96H72 371 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 FERMT1Q9BQL6 677 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 TRIM51Q9BSJ1 452 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 PCDH9Q9HC56 1237 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 MARK1Q9P0L2 795 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 ASIC3Q9UHC3 531 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 DNPEPQ9ULA0 475 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 NEU2Q9Y3R4 380 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 GVINP1Q7Z2Y8 2422 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 ESYT3A0FGR9 886 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 HACD1B0YJ81 288 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 PENKP01210 267 aaPredicted RBP16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 IGLV3-25P01717 112 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 KRT14P02533 472 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 HNRNPLP14866 589 aaKnown RBP eCLIP16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 IL4RP24394 825 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 ECHS1P30084 290 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 SLC6A4P31645 630 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 CXCL12P48061 93 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 PXNP49023 591 aaPredicted RBP16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 TBX4P57082 545 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 MRPS25P82663 173 aaKnown RBP16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 OTUD4Q01804 1114 aaKnown RBP16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 NOMO1Q15155 1222 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 FAM133BQ5BKY9 247 aaKnown RBP16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 ZC3H12AQ5D1E8 599 aaKnown RBP16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 OTUD1Q5VV17 481 aaPredicted RBP16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 RFWD3Q6PCD5 774 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 SYNPOQ8N3V7 929 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 PLD5Q8N7P1 536 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 USP33Q8TEY7 942 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 ATG4AQ8WYN0 398 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 NELL1Q92832 810 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 FAM122AQ96E09 287 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 OSBPL2Q9H1P3 480 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 WDCPQ9H6R7 721 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 FAM204AQ9H8W3 233 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 MED4Q9NPJ6 270 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 ARHGEF4Q9NR80 690 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 ZDHHC18Q9NUE0 388 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 DDIT4Q9NX09 232 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 FBXO10Q9UK96 956 aa16.86■□□□□ 0.29
PDLIM1-201ENST00000329399 FAM186AA6NE01 2351 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 OTOGLQ3ZCN5 2332 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 ZSCAN5CA6NGD5 496 aaPredicted RBP16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 PRRT4C9JH25 899 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 CACNG3O60359 315 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 CD48P09326 243 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 ADCY8P40145 1251 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 KIR2DL1P43626 348 aaPredicted RBP16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 RPL21P46778 160 aaKnown RBP16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 EIF3EP60228 445 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms