RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 CARNS1A5YM72 827 aa18.81■□□□□ 0.6
USP39-201ENST00000323701 C2orf71A6NGG8 1288 aa18.81■□□□□ 0.6
USP39-201ENST00000323701 GJA1P17302 382 aa18.81■□□□□ 0.6
USP39-201ENST00000323701 PHBP35232 272 aa18.81■□□□□ 0.6
USP39-201ENST00000323701 IRS1P35568 1242 aa18.81■□□□□ 0.6
USP39-201ENST00000323701 HARS2P49590 506 aaKnown RBP18.81■□□□□ 0.6
USP39-201ENST00000323701 STXBP5Q5T5C0 1151 aa18.81■□□□□ 0.6
USP39-201ENST00000323701 TADA2BQ86TJ2 420 aa18.81■□□□□ 0.6
USP39-201ENST00000323701 TDRPQ86YL5 185 aa18.81■□□□□ 0.6
USP39-201ENST00000323701 SPPL3Q8TCT6 385 aa18.81■□□□□ 0.6
USP39-201ENST00000323701 PAFAH2Q99487 392 aa18.81■□□□□ 0.6
USP39-201ENST00000323701 VAT1Q99536 393 aa18.81■□□□□ 0.6
USP39-201ENST00000323701 DHRS4Q9BTZ2 278 aa18.81■□□□□ 0.6
USP39-201ENST00000323701 ENTPD7Q9NQZ7 604 aa18.81■□□□□ 0.6
USP39-201ENST00000323701 SYBUQ9NX95 663 aa18.81■□□□□ 0.6
USP39-201ENST00000323701 ZFP37Q9Y6Q3 630 aaPredicted RBP18.81■□□□□ 0.6
USP39-201ENST00000323701 XIRP2A4UGR9 3374 aa18.8■□□□□ 0.6
USP39-201ENST00000323701 A0A0D9SEW6 157 aa18.8■□□□□ 0.6
USP39-201ENST00000323701 H3BNC9 293 aa18.8■□□□□ 0.6
USP39-201ENST00000323701 CPP00450 1065 aa18.8■□□□□ 0.6
USP39-201ENST00000323701 C8AP07357 584 aa18.8■□□□□ 0.6
USP39-201ENST00000323701 OR1E1P30953 314 aa18.8■□□□□ 0.6
USP39-201ENST00000323701 NDST2P52849 883 aa18.8■□□□□ 0.6
USP39-201ENST00000323701 GEMIN4P57678 1058 aaKnown RBP18.8■□□□□ 0.6
USP39-201ENST00000323701 IHHQ14623 411 aa18.8■□□□□ 0.6
USP39-201ENST00000323701 C9orf50Q5SZB4 431 aa18.8■□□□□ 0.6
USP39-201ENST00000323701 TMC8Q8IU68 726 aa18.8■□□□□ 0.6
USP39-201ENST00000323701 KREMEN2Q8NCW0 462 aa18.8■□□□□ 0.6
USP39-201ENST00000323701 DCAKDQ8WVC6 231 aa18.8■□□□□ 0.6
USP39-201ENST00000323701 POF1BQ8WVV4 589 aa18.8■□□□□ 0.6
USP39-201ENST00000323701 SELENOSQ9BQE4 189 aa18.8■□□□□ 0.6
USP39-201ENST00000323701 F5H5T6 163 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 CACNG3O60359 315 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 GREM1O60565 184 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 UGT1A9O60656 530 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 FAM155BO75949 473 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 SUN1O94901 812 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 MLNP12872 115 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 GABRR2P28476 465 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 SLC10A7Q0GE19 358 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 SMAD1Q15797 465 aaKnown RBP18.79■□□□□ 0.6
USP39-201ENST00000323701 ZSCAN26Q16670 478 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 C5orf22Q49AR2 442 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 CES3Q6UWW8 571 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 SRRM1Q8IYB3 904 aaKnown RBP18.79■□□□□ 0.6
USP39-201ENST00000323701 MRPL43Q8N983 215 aaKnown RBP18.79■□□□□ 0.6
USP39-201ENST00000323701 UGT1A7Q9HAW7 530 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 UGT1A10Q9HAW8 530 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 UGT1A8Q9HAW9 530 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 RBM22Q9NW64 420 aaKnown RBP eCLIP18.79■□□□□ 0.6
USP39-201ENST00000323701 ACTL7AQ9Y615 435 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 A0A1W2PPM1 405 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 TTC24A2A3L6 582 aaPredicted RBP18.79■□□□□ 0.6
USP39-201ENST00000323701 TSPAN3O60637 253 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 MBL2P11226 248 aaPredicted RBP18.79■□□□□ 0.6
USP39-201ENST00000323701 TSHRP16473 764 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 PLD4Q96BZ4 506 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 LRRC39Q96DD0 335 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 HCFC1R1Q9NWW0 138 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 IL1RAPL1Q9NZN1 696 aa18.79■□□□□ 0.6
USP39-201ENST00000323701 UNC80Q8N2C7 3258 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 SDR42E2A6NKP2 422 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 ADH1AP07327 375 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 CHN1P15882 459 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 TPH1P17752 444 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 SLC11A2P49281 568 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 CREMQ03060 361 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 POLD3Q15054 466 aaPredicted RBP18.78■□□□□ 0.6
USP39-201ENST00000323701 ITPRIPL1Q6GPH6 555 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 CASC4Q6P4E1 433 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 TTC16Q8NEE8 873 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 PHOSPHO2Q8TCD6 241 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 STAMBPL1Q96FJ0 436 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 GLOD4Q9HC38 313 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 SLC17A6Q9P2U8 582 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 IRAK3Q9Y616 596 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 GRM6O15303 877 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 CCL16O15467 120 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 RAMP2O60895 175 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 RFPL2O75678 378 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 GJB3O75712 270 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 CCR2P41597 374 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 MAXP61244 160 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 SARNPP82979 210 aaKnown RBP18.78■□□□□ 0.6
USP39-201ENST00000323701 SERINC3Q13530 473 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 CERCAMQ5T4B2 595 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 ADGRD1Q6QNK2 874 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 TRABD2AQ86V40 505 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 MAB21L3Q8N8X9 362 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 MZB1Q8WU39 189 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 PABPC5Q96DU9 382 aaKnown RBP18.78■□□□□ 0.6
USP39-201ENST00000323701 CYTH2Q99418 400 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 CASS4Q9NQ75 786 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 PSMC3IPQ9P2W1 217 aaPredicted RBP18.78■□□□□ 0.6
USP39-201ENST00000323701 UXTQ9UBK9 157 aaPredicted RBP18.78■□□□□ 0.6
USP39-201ENST00000323701 SLC24A2Q9UI40 661 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 MAFFQ9ULX9 164 aa18.78■□□□□ 0.6
USP39-201ENST00000323701 OLFM2O95897 454 aa18.77■□□□□ 0.6
USP39-201ENST00000323701 HDCP19113 662 aa18.77■□□□□ 0.6
USP39-201ENST00000323701 LSP1P33241 339 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms