RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 TRIM62Q9BVG3 475 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 ZNF358Q9NW07 568 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 EURLQ9NYK6 297 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 RRN3Q9NYV6 651 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 XPR1Q9UBH6 696 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 CNTN6Q9UQ52 1028 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 FAM95CA0A1B0GW59 222 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 GOLGA8CPA6NN73 597 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 C16orf96A6NNT2 1141 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 GPR25O00155 361 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 CLOCKO15516 846 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 RNASEH1O60930 286 aaKnown RBP12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 ZNF23P17027 643 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 NOS2P35228 1153 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 MAP3K7CLP57077 242 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 CDC42EP1Q00587 391 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 ZBTB17Q13105 803 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 SEMA5AQ13591 1074 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 RDH11Q8TC12 318 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 CCDC97Q96F63 343 aaPredicted RBP12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 HSFY1Q96LI6 401 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 CCDC106Q9BWC9 280 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 OSBPL11Q9BXB4 747 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 NR2E3Q9Y5X4 410 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 SPDYE16A6NNV3 312 aaPredicted RBP12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 MFSD11O43934 449 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 LRPAP1P30533 357 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 HK2P52789 917 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 TAF12Q16514 161 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 CAND1Q86VP6 1230 aaKnown RBP12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 SLC41A1Q8IVJ1 513 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 KIAA0319LQ8IZA0 1049 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 PGAM4Q8N0Y7 254 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 ANKRD52Q8NB46 1076 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 WNT8BQ93098 351 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 SIGLEC10Q96LC7 697 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 BRD8Q9H0E9 1235 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 RNF19AQ9NV58 838 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 SETD4Q9NVD3 440 aa12.96□□□□□ -0.33
DNMT3A-202ENST00000321117 ZNF839A8K0R7 811 aa12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 CCNT2O60583 730 aaKnown RBP12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 ESRRBO95718 433 aa12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 CHRM1P11229 460 aaPredicted RBP12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 TFEBP19484 476 aa12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 NFKB1P19838 968 aa12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 HMOX2P30519 316 aa12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 LIMK2P53671 638 aa12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 ARL13AQ5H913 290 aaPredicted RBP12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 PIWIL4Q7Z3Z4 852 aaKnown RBP12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 FBXO27Q8NI29 283 aa12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 OLIG1Q8TAK6 271 aa12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 DNAJC1Q96KC8 554 aaKnown RBP12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 PEBP4Q96S96 227 aa12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 KCTD15Q96SI1 283 aaPredicted RBP12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 VAT1Q99536 393 aa12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 RBBP8Q99708 897 aa12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 CATSPERBQ9H7T0 1116 aa12.96□□□□□ -0.34
DNMT3A-202ENST00000321117 ERCC2P18074 760 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 CLDN10P78369 228 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 HSDL1Q3SXM5 330 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 PHTF2Q8N3S3 785 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 COPS5Q92905 334 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 MRPL45Q9BRJ2 306 aaKnown RBP12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 KCNK13Q9HB14 408 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 CDHR5Q9HBB8 845 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 DTLQ9NZJ0 730 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 KLHL33A6NCF5 533 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 TRMUO75648 421 aaKnown RBP12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 MATKP42679 507 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 ADGRE1Q14246 886 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 LSM12Q3MHD2 195 aaKnown RBP12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 CELF3Q5SZQ8 465 aaKnown RBP12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 MBLAC2Q68D91 279 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 OR52E8Q6IFG1 317 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 FSTL4Q6MZW2 842 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 ILDR2Q71H61 639 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 PATL1Q86TB9 770 aaKnown RBP12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 PIGZQ86VD9 579 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 OR6J1Q8NGC5 347 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 AP5M1Q9H0R1 490 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 SPC25Q9HBM1 224 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 CYLDQ9NQC7 956 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 PNPLA3Q9NST1 481 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 BLOC1S6Q9UL45 172 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 FGFR1P11362 822 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 DNAJB2P25686 324 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 GRIA3P42263 894 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 GALK1P51570 392 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 FUT11Q495W5 492 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 CERCAMQ5T4B2 595 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 GATA6Q92908 595 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 FAM210AQ96ND0 272 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 DHRS4Q9BTZ2 278 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 SARS2Q9NP81 518 aaKnown RBP12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 SPAG4Q9NPE6 437 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 HACD3Q9P035 362 aa12.95□□□□□ -0.34
DNMT3A-202ENST00000321117 A0A088AWK7 358 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 FBXO21O94952 628 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 IL1BP01584 269 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 SNRPB2P08579 225 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms