RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 MAP2P11137 1827 aaKnown RBP4.38□□□□□ -1.71
SMCO3-201ENST00000316048 CDK12Q9NYV4 1490 aaPredicted RBP4.38□□□□□ -1.71
SMCO3-201ENST00000316048 NPHP4O75161 1426 aaPredicted RBP4.38□□□□□ -1.71
SMCO3-201ENST00000316048 CYP3A7-CYP3A51PA0A087WV96 503 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 PIPSLA2A3N6 862 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 C17orf100A8MU93 164 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 K7ENM7 598 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 K7ESM1 405 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 PRYO14603 147 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 SYN3O14994 580 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 MPPED1O15442 326 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 ZBED4O75132 1171 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 URI1O94763 535 aaPredicted RBP4.38□□□□□ -1.71
SMCO3-201ENST00000316048 ONECUT2O95948 504 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 HMOX1P09601 288 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 APEHP13798 732 aaKnown RBP4.38□□□□□ -1.71
SMCO3-201ENST00000316048 CYP3A7P24462 503 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 NDUFS1P28331 727 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 FOLR3P41439 243 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 MVDP53602 400 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 RARSP54136 660 aaKnown RBP4.38□□□□□ -1.71
SMCO3-201ENST00000316048 PLP2Q04941 152 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 DCTN2Q13561 401 aaKnown RBP4.38□□□□□ -1.71
SMCO3-201ENST00000316048 AP5B1Q2VPB7 878 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 AWAT1Q58HT5 328 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 KCNV1Q6PIU1 500 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 KRBA2Q6ZNG9 492 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 RNF207Q6ZRF8 634 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 TMTC3Q6ZXV5 915 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 PARS2Q7L3T8 475 aaKnown RBP4.38□□□□□ -1.71
SMCO3-201ENST00000316048 MRGPREQ86SM8 312 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 KRTAP1-3Q8IUG1 177 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 METTL6Q8TCB7 284 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 CREB3L4Q8TEY5 395 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 C2CD4CQ8TF44 421 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 GPR78Q96P69 363 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 SNX18Q96RF0 628 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMCO3-201ENST00000316048 CINPQ9BW66 212 aaPredicted RBP4.38□□□□□ -1.71
SMCO3-201ENST00000316048 FSD1LQ9BXM9 530 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 INTS2Q9H0H0 1204 aaKnown RBP4.38□□□□□ -1.71
SMCO3-201ENST00000316048 SMYD2Q9NRG4 433 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 SNX15Q9NRS6 342 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 SMPD4Q9NXE4 827 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 CD207Q9UJ71 328 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 ADAMTS5Q9UNA0 930 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 ZNF142P52746 1687 aaPredicted RBP4.38□□□□□ -1.71
SMCO3-201ENST00000316048 XRN1Q8IZH2 1706 aaKnown RBP4.38□□□□□ -1.71
SMCO3-201ENST00000316048 TOPAZ1Q8N9V7 1692 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 SSH2Q76I76 1423 aa4.38□□□□□ -1.71
SMCO3-201ENST00000316048 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 C16orf96A6NNT2 1141 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 F5H0A9 414 aaPredicted RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 IFNL4K9M1U5 179 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 ZNF213O14771 459 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 TNFSF14O43557 240 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 PTP4A3O75365 173 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 MLYCDO95822 493 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 C1RP00736 705 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 IGFBP2P18065 325 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 ICAM3P32942 547 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 AMPHP49418 695 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 WDR5P61964 334 aaKnown RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 SETQ01105 290 aaPredicted RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 NAA25Q14CX7 972 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 C20orf194Q5TEA3 1177 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 MTFR2Q6P444 385 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 MTHFD1LQ6UB35 978 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 ATF7IPQ6VMQ6 1270 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 Q6ZNX1 250 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 USP51Q70EK9 711 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 PXKQ7Z7A4 578 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 ADGRG6Q86SQ4 1221 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 SCN4BQ8IWT1 228 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 DIS3L2Q8IYB7 885 aaKnown RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 PLD5Q8N7P1 536 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 RP9Q8TA86 221 aaKnown RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 AKAP1Q92667 903 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 FRAT1Q92837 279 aaPredicted RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 PERPQ96FX8 193 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 ITPAQ9BY32 194 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 SLC22A11Q9NSA0 550 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 SLC25A10Q9UBX3 287 aaPredicted RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 ENTPD2Q9Y5L3 495 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 FNDC1Q4ZHG4 1894 aaPredicted RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 CHD2O14647 1828 aaKnown RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 TCERG1O14776 1098 aaKnown RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 IPO8O15397 1037 aaKnown RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 TMEM63AO94886 807 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 TJP3O95049 919 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 URODP06132 367 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 ALDOCP09972 364 aaKnown RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 CYP2D6P10635 497 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 SLC8A1P32418 973 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 STAT1P42224 750 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 TBL3Q12788 808 aaKnown RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 EIF4A2Q14240 407 aaKnown RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 MFSD13AQ14CX5 517 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 SEC23BQ15437 767 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 ZNF667Q5HYK9 610 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms