RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 RHOQP17081 205 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 CNTFP26441 200 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 OR1D2P34982 312 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 IKBKEQ14164 716 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 USP41Q3LFD5 358 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 LACTB2Q53H82 288 aaPredicted RBP18.73■□□□□ 0.59
CCDC43-201ENST00000315286 RAP1GAP2Q684P5 730 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 NAPEPLDQ6IQ20 393 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 SLC8B1Q6J4K2 584 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 TIFABQ6ZNK6 161 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 PTPRN2Q92932 1015 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 THOC1Q96FV9 657 aaKnown RBP18.73■□□□□ 0.59
CCDC43-201ENST00000315286 FCRL5Q96RD9 977 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 ZYG11BQ9C0D3 744 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 RBM22Q9NW64 420 aaKnown RBP eCLIP18.73■□□□□ 0.591e-7■■■■■ 41.1
CCDC43-201ENST00000315286 MTRRQ9UBK8 725 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 IPO11Q9UI26 975 aaKnown RBP18.73■□□□□ 0.59
CCDC43-201ENST00000315286 AAR2Q9Y312 384 aaKnown RBP18.73■□□□□ 0.59
CCDC43-201ENST00000315286 ZCWPW2A0A1B0GU75 182 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 PSMD3O43242 534 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 IGLV3-27P01718 113 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 ANKRD20A4Q4UJ75 823 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 TIGD7Q6NT04 549 aaPredicted RBP18.72■□□□□ 0.59
CCDC43-201ENST00000315286 FBXL22Q6P050 247 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 RASSF3Q86WH2 238 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 UMODL1-AS1Q8N2C9 162 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 IGSF8Q969P0 613 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 MFSD3Q96ES6 412 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 IQCGQ9H095 443 aaKnown RBP18.72■□□□□ 0.59
CCDC43-201ENST00000315286 MANSC1Q9H8J5 431 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 CHRAC1Q9NRG0 131 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 PCMTD2Q9NV79 361 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 ZFATQ9P243 1243 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 PPARGC1AQ9UBK2 798 aaKnown RBP18.72■□□□□ 0.59
CCDC43-201ENST00000315286 PLLPQ9Y342 182 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 IGLV3-10A0A075B6K4 115 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 C2CD2LO14523 706 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 TLR5O60602 858 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 USP1O94782 785 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 HLA-DQB2P05538 268 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 CDH17Q12864 832 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 NAB1Q13506 487 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 OTOAQ7RTW8 1153 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 LRRC49Q8IUZ0 686 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 NDUFAF2Q8N183 169 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.72■□□□□ 0.59
CCDC43-201ENST00000315286 IGSF21Q96ID5 467 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 UBE2OQ9C0C9 1292 aaKnown RBP18.72■□□□□ 0.59
CCDC43-201ENST00000315286 IL22Q9GZX6 179 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 TMEM248Q9NWD8 314 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 FNIP2Q9P278 1114 aa18.72■□□□□ 0.59
CCDC43-201ENST00000315286 FAM237BA0A1B0GVD1 139 aa18.71■□□□□ 0.59
CCDC43-201ENST00000315286 MAGEB16A2A368 324 aa18.71■□□□□ 0.59
CCDC43-201ENST00000315286 FSBPO95073 299 aa18.71■□□□□ 0.59
CCDC43-201ENST00000315286 NDST2P52849 883 aa18.71■□□□□ 0.59
CCDC43-201ENST00000315286 ACTN3Q08043 901 aaPredicted RBP18.71■□□□□ 0.59
CCDC43-201ENST00000315286 LINC00523Q86TU6 105 aa18.71■□□□□ 0.59
CCDC43-201ENST00000315286 CHSY1Q86X52 802 aa18.71■□□□□ 0.59
CCDC43-201ENST00000315286 RNF168Q8IYW5 571 aaPredicted RBP18.71■□□□□ 0.59
CCDC43-201ENST00000315286 DIS3LQ8TF46 1054 aaKnown RBP18.71■□□□□ 0.59
CCDC43-201ENST00000315286 HMCESQ96FZ2 354 aa18.71■□□□□ 0.59
CCDC43-201ENST00000315286 RMDN2Q96LZ7 410 aa18.71■□□□□ 0.59
CCDC43-201ENST00000315286 TTLL2Q9BWV7 592 aa18.71■□□□□ 0.59
CCDC43-201ENST00000315286 MKS1Q9NXB0 559 aa18.71■□□□□ 0.59
CCDC43-201ENST00000315286 KLHL14Q9P2G3 628 aa18.71■□□□□ 0.59
CCDC43-201ENST00000315286 TBX21Q9UL17 535 aa18.71■□□□□ 0.59
CCDC43-201ENST00000315286 ANXA9O76027 345 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 PEX11BO96011 259 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 SERPINB4P48594 390 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 ZNF449Q6P9G9 518 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 CNKSR3Q6P9H4 555 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 MICALL1Q8N3F8 863 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 IPMKQ8NFU5 416 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 CRISPLD2Q9H0B8 497 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 ATP11BQ9Y2G3 1177 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 BACE2Q9Y5Z0 518 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 ALDOAP04075 364 aaKnown RBP18.7■□□□□ 0.58
CCDC43-201ENST00000315286 SCTRP47872 440 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 RING1Q06587 406 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 KIAA1841Q6NSI8 718 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 TMCO2Q7Z6W1 182 aaPredicted RBP18.7■□□□□ 0.58
CCDC43-201ENST00000315286 MYEOVQ96EZ4 313 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 TBL1YQ9BQ87 522 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 PLCD4Q9BRC7 762 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 BEGAINQ9BUH8 593 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 ACTR5Q9H9F9 607 aaPredicted RBP18.7■□□□□ 0.58
CCDC43-201ENST00000315286 SOX13Q9UN79 622 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 CAPN7Q9Y6W3 813 aa18.7■□□□□ 0.58
CCDC43-201ENST00000315286 DRGXA6NNA5 263 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 J3KR12 359 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 AP3B1O00203 1094 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 TOP3BO95985 862 aaKnown RBP18.69■□□□□ 0.58
CCDC43-201ENST00000315286 ITGA2BP08514 1039 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 NMBRP28336 390 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 CRHR1P34998 444 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 KCNQ1P51787 676 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 FRG1Q14331 258 aaKnown RBP18.69■□□□□ 0.58
CCDC43-201ENST00000315286 ANO4Q32M45 955 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 RNF43Q68DV7 783 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 NADSYN1Q6IA69 706 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms