RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 AHSPQ9NZD4 102 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 EML1O00423 815 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 CTSHP09668 335 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 OXCT1P55809 520 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 SPPL2AQ8TCT8 520 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 HBS1LQ9Y450 684 aaKnown RBP13.37□□□□□ -0.27
SNED1-201ENST00000310397 BNIP1Q12981 228 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 SYTL1Q8IYJ3 562 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 BORCS5Q969J3 196 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 FAM136AQ96C01 138 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 SMARCD1Q96GM5 515 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 PDCD2LQ9BRP1 358 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 TMEM109Q9BVC6 243 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 EPB41L4BQ9H329 900 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 ATP5F1P24539 256 aaPredicted RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 GRIA4P48058 902 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 FMO1Q01740 532 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 IKBIPQ70UQ0 350 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 MTG1Q9BT17 334 aaPredicted RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 TRAFD1O14545 582 aaPredicted RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 HYIQ5T013 277 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 MCRS1Q96EZ8 462 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 EBNA1BP2Q99848 306 aaKnown RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 GINS4Q9BRT9 223 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 PADI4Q9UM07 663 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 GSTK1Q9Y2Q3 226 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 CNTRLQ7Z7A1 2325 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 RAMP2O60895 175 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 MLYCDO95822 493 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 NUP62P37198 522 aaPredicted RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 OAZ1P54368 228 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 PWP1Q13610 501 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 KCTD21Q4G0X4 260 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 C16orf46Q6P387 395 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 CPB2Q96IY4 423 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 HGH1Q9BTY7 390 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 TMEM134Q9H6X4 195 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 LNPEPQ9UIQ6 1025 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 SPATA2Q9UM82 520 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 ARHGAP23Q9P227 1491 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 TCRBV9S1A1TA0A576 114 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 H7C4K7 107 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 PSME3P61289 254 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 GPSM1Q86YR5 675 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 STAG3L4Q8TBR4 150 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 PLEKHG4BQ96PX9 1271 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 RPS6KA6Q9UK32 745 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 FAM208AQ9UK61 1670 aaKnown RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 C17orf102A2RUQ5 167 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 H0YC42 278 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 RPL22P35268 128 aaKnown RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 IFNGR2P38484 337 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 MARCKSL1P49006 195 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 UBAP2LQ14157 1087 aaKnown RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 NDUFA5Q16718 116 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 GLIS3Q8NEA6 775 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 WDR36Q8NI36 951 aaKnown RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 CENPIQ92674 756 aaPredicted RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 PURBQ96QR8 312 aaKnown RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 ACE2Q9BYF1 805 aaPredicted RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 PSMD13Q9UNM6 376 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 SPACA6W5XKT8 324 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 DHRS12A0PJE2 317 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 CPSF4O95639 269 aaKnown RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 ZNF7P17097 686 aaPredicted RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 ZNF572Q7Z3I7 529 aaPredicted RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 CDHR5Q9HBB8 845 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 CRNNQ9UBG3 495 aaPredicted RBP13.36□□□□□ -0.27
SNED1-201ENST00000310397 NUDT5Q9UKK9 219 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 RAB26Q9ULW5 256 aa13.36□□□□□ -0.27
SNED1-201ENST00000310397 EGFRP00533 1210 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 CYP2C18P33260 490 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 NOS2P35228 1153 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 PLK1P53350 603 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 TPD52L3Q96J77 140 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 TEKT5Q96M29 485 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 DYRK1BQ9Y463 629 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 AP4B1Q9Y6B7 739 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 TSC22D2O75157 780 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 STX11O75558 287 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 TM7SF2O76062 418 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 EPN2O95208 641 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 TRUB2O95900 331 aaKnown RBP13.35□□□□□ -0.27
SNED1-201ENST00000310397 IRF1P10914 325 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 GRK3P35626 688 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 CHKAP35790 457 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 BLMHQ13867 455 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 CDC73Q6P1J9 531 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 SLC44A2Q8IWA5 706 aaPredicted RBP13.35□□□□□ -0.27
SNED1-201ENST00000310397 FAM13CQ8NE31 585 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 RNF157Q96PX1 679 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 LEF1Q9UJU2 399 aaPredicted RBP13.35□□□□□ -0.27
SNED1-201ENST00000310397 E5RJQ4 531 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 SNPHO15079 494 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 ALOX5P09917 674 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 HPCAL1P37235 193 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 NEPROQ6NW34 567 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 KIAA0408Q6ZU52 694 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 UBASH3BQ8TF42 649 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms