RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 ACSL3O95573 720 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 APRTP07741 180 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 RHOCP08134 193 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 DNAJB1P25685 340 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 HALP42357 657 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 TRPC1P48995 793 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 TLE2Q04725 743 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 RAB30Q15771 203 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 SMTNL2Q2TAL5 461 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 MARC1Q5VT66 337 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 DPY19L2P1Q6NXN4 242 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 EFL1Q7Z2Z2 1120 aaKnown RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 TMC7Q7Z402 723 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 C11orf96Q7Z7L8 435 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 RASSF3Q86WH2 238 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 NUDCD3Q8IVD9 361 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 TRPV1Q8NER1 839 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 CCT6BQ92526 530 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 ALG3Q92685 438 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 LMAN2LQ9H0V9 348 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 MAGED2Q9UNF1 606 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 TFR2Q9UP52 801 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 TTLL3Q9Y4R7 772 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 KIAA1217Q5T5P2 1943 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 HEATR9A2RTY3 570 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 HGSO14964 777 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 ALOX15BO15296 676 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 MOCS2O96007 188 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 PRLP01236 227 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 MPOP05164 745 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 HAPLN1P10915 354 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 PCSK2P16519 638 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 TAS2R40P59535 323 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 RPL7AP62424 266 aaKnown RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 GRTP1Q5TC63 336 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 PDPK2PQ6A1A2 396 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 MSANTD2Q6P1R3 559 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 FAM171BQ6P995 826 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 PRR23CQ6ZRP0 262 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 DDX53Q86TM3 631 aaKnown RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 SLC26A11Q86WA9 606 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 LRRC6Q86X45 466 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 TDRPQ86YL5 185 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 ST13P4Q8IZP2 240 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 HS6ST3Q8IZP7 471 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 SEC14L1Q92503 715 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 LENG1Q96BZ8 264 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 ZIM3Q96PE6 472 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 RAB3IPQ96QF0 476 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 NPY6RQ99463 290 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 CORO1BQ9BR76 489 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 UQCC2Q9BRT2 126 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 MAGEH1Q9H213 219 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 PREBQ9HCU5 417 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 C8orf4Q9NR00 106 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 ASAH2Q9NR71 780 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 DCDC2Q9UHG0 476 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 DMGDHQ9UI17 866 aaKnown RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 FAM47DPA6NHR8 397 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 PDE2AO00408 941 aaPredicted RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 NRP1O14786 923 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 RIPK2O43353 540 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 SEC24DO94855 1032 aaPredicted RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 GLUD1P00367 558 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 TIMP1P01033 207 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 KLRC2P26717 231 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 RPL34P49207 117 aaKnown RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 PPM1FP49593 454 aaPredicted RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 EIF2B2P49770 351 aaKnown RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 HK2P52789 917 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 SLC5A3P53794 718 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 MGAT5Q09328 741 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 EFEMP1Q12805 493 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 SLC12A1Q13621 1099 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 FLOT2Q14254 428 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 PAFAH1B3Q15102 231 aaKnown RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 LYPLAL1Q5VWZ2 237 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 SLC9A4Q6AI14 798 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 MRNIPQ6NTE8 343 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 POTEHQ6S545 545 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 CHST9Q7L1S5 443 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 TMEM192Q8IY95 271 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 FUKQ8N0W3 1084 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 RFWD2Q8NHY2 731 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 SLC35B2Q8TB61 432 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 ZFP42Q96MM3 310 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 XPO6Q96QU8 1125 aaKnown RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 C12orf4Q9NQ89 552 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 KCTD5Q9NXV2 234 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 IGSF9Q9P2J2 1179 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 PPARGC1AQ9UBK2 798 aaKnown RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 GRID1Q9ULK0 1009 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 PARP14Q460N5 1801 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 C2orf81A6NN90 581 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 H0Y3Z8 333 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 CASQ2O14958 399 aaPredicted RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 DNAJC6O75061 913 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 HNRNPA1P09651 372 aaKnown RBP eCLIP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 PMLP29590 882 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 SSTR3P32745 418 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms