RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 IL12RB2Q99665 862 aa23.02■■□□□ 1.28
IRF3-201ENST00000309877 PHACTR1Q9C0D0 580 aa23.02■■□□□ 1.28
IRF3-201ENST00000309877 GBA3Q9H227 469 aa23.02■■□□□ 1.28
IRF3-201ENST00000309877 RBM22Q9NW64 420 aaKnown RBP eCLIP23.02■■□□□ 1.28
IRF3-201ENST00000309877 NUP205Q92621 2012 aa23.01■■□□□ 1.27
IRF3-201ENST00000309877 DOCK4Q8N1I0 1966 aa23.01■■□□□ 1.27
IRF3-201ENST00000309877 ILVBLA1L0T0 632 aa23.01■■□□□ 1.27
IRF3-201ENST00000309877 H0Y626 953 aa23.01■■□□□ 1.27
IRF3-201ENST00000309877 J3KR12 359 aa23.01■■□□□ 1.27
IRF3-201ENST00000309877 PAPLNO95428 1278 aa23.01■■□□□ 1.27
IRF3-201ENST00000309877 RENBPP51606 427 aa23.01■■□□□ 1.27
IRF3-201ENST00000309877 PRPSAP1Q14558 356 aa23.01■■□□□ 1.27
IRF3-201ENST00000309877 FNBP1LQ5T0N5 605 aa23.01■■□□□ 1.27
IRF3-201ENST00000309877 IL31Q6EBC2 164 aa23.01■■□□□ 1.27
IRF3-201ENST00000309877 CARNMT1Q8N4J0 409 aa23.01■■□□□ 1.27
IRF3-201ENST00000309877 ITFG1Q8TB96 612 aa23.01■■□□□ 1.27
IRF3-201ENST00000309877 MAML1Q92585 1016 aa23.01■■□□□ 1.27
IRF3-201ENST00000309877 GFRA2O00451 464 aa23■■□□□ 1.27
IRF3-201ENST00000309877 EIF3HO15372 352 aaKnown RBP eCLIP23■■□□□ 1.27
IRF3-201ENST00000309877 NFKB1P19838 968 aa23■■□□□ 1.27
IRF3-201ENST00000309877 CD68P34810 354 aaPredicted RBP23■■□□□ 1.27
IRF3-201ENST00000309877 CDK16Q00536 496 aa23■■□□□ 1.27
IRF3-201ENST00000309877 IL10RBQ08334 325 aa23■■□□□ 1.27
IRF3-201ENST00000309877 HNRNPDQ14103 355 aaKnown RBP23■■□□□ 1.27
IRF3-201ENST00000309877 CBX2Q14781 532 aaPredicted RBP23■■□□□ 1.27
IRF3-201ENST00000309877 TCEAL5Q5H9L2 206 aa23■■□□□ 1.27
IRF3-201ENST00000309877 ZBED8Q8IZ13 594 aa23■■□□□ 1.27
IRF3-201ENST00000309877 PDCD7Q8N8D1 485 aaKnown RBP23■■□□□ 1.27
IRF3-201ENST00000309877 DDI1Q8WTU0 396 aa23■■□□□ 1.27
IRF3-201ENST00000309877 PABPC5Q96DU9 382 aaKnown RBP23■■□□□ 1.27
IRF3-201ENST00000309877 ZSWIM3Q96MP5 696 aa23■■□□□ 1.27
IRF3-201ENST00000309877 SPON2Q9BUD6 331 aa23■■□□□ 1.27
IRF3-201ENST00000309877 EIF2B3Q9NR50 452 aaKnown RBP23■■□□□ 1.27
IRF3-201ENST00000309877 TBC1D30Q9Y2I9 924 aa23■■□□□ 1.27
IRF3-201ENST00000309877 TTLL3Q9Y4R7 772 aa23■■□□□ 1.27
IRF3-201ENST00000309877 A0A0D9SEW6 157 aa23■■□□□ 1.27
IRF3-201ENST00000309877 ALOX15BO15296 676 aa23■■□□□ 1.27
IRF3-201ENST00000309877 RIPK2O43353 540 aa23■■□□□ 1.27
IRF3-201ENST00000309877 HYAL1Q12794 435 aa23■■□□□ 1.27
IRF3-201ENST00000309877 KYNUQ16719 465 aa23■■□□□ 1.27
IRF3-201ENST00000309877 BBS9Q3SYG4 887 aa23■■□□□ 1.27
IRF3-201ENST00000309877 MPPE1Q53F39 396 aa23■■□□□ 1.27
IRF3-201ENST00000309877 MARC1Q5VT66 337 aa23■■□□□ 1.27
IRF3-201ENST00000309877 CNTD1Q8N815 330 aa23■■□□□ 1.27
IRF3-201ENST00000309877 OR7D4Q8NG98 312 aa23■■□□□ 1.27
IRF3-201ENST00000309877 C9orf72Q96LT7 481 aa23■■□□□ 1.27
IRF3-201ENST00000309877 SERPINB12Q96P63 405 aa23■■□□□ 1.27
IRF3-201ENST00000309877 ZNF576Q9H609 170 aa23■■□□□ 1.27
IRF3-201ENST00000309877 NINJ2Q9NZG7 142 aa23■■□□□ 1.27
IRF3-201ENST00000309877 LUC7L3O95232 432 aaKnown RBP22.99■■□□□ 1.27
IRF3-201ENST00000309877 TTC4O95801 387 aa22.99■■□□□ 1.27
IRF3-201ENST00000309877 CYBBP04839 570 aa22.99■■□□□ 1.27
IRF3-201ENST00000309877 ETFBP38117 255 aa22.99■■□□□ 1.27
IRF3-201ENST00000309877 SLC29A2Q14542 456 aa22.99■■□□□ 1.27
IRF3-201ENST00000309877 HP1BP3Q5SSJ5 553 aaPredicted RBP22.99■■□□□ 1.27
IRF3-201ENST00000309877 LRIG3Q6UXM1 1119 aa22.99■■□□□ 1.27
IRF3-201ENST00000309877 TPGS1Q6ZTW0 290 aa22.99■■□□□ 1.27
IRF3-201ENST00000309877 ARID3BQ8IVW6 561 aaPredicted RBP22.99■■□□□ 1.27
IRF3-201ENST00000309877 CCDC117Q8IWD4 279 aaPredicted RBP22.99■■□□□ 1.27
IRF3-201ENST00000309877 EFHBQ8N7U6 833 aa22.99■■□□□ 1.27
IRF3-201ENST00000309877 BHMTQ93088 406 aa22.99■■□□□ 1.27
IRF3-201ENST00000309877 APOL5Q9BWW9 433 aa22.99■■□□□ 1.27
IRF3-201ENST00000309877 MUC3BQ9H195 1237 aa22.99■■□□□ 1.27
IRF3-201ENST00000309877 EPB41L4BQ9H329 900 aa22.99■■□□□ 1.27
IRF3-201ENST00000309877 GLOD4Q9HC38 313 aa22.99■■□□□ 1.27
IRF3-201ENST00000309877 RANBP2P49792 3224 aaKnown RBP22.99■■□□□ 1.27
IRF3-201ENST00000309877 ATG2AQ2TAZ0 1938 aa22.99■■□□□ 1.27
IRF3-201ENST00000309877 GOLGA6CA6NDK9 693 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 PRAMEF11O60813 436 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 PRAMEF12O95522 483 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 ACSL3O95573 720 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 PEX11BO96011 259 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 GOLGA6DP0CG33 693 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 OXCT1P55809 520 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 IFFO1Q0D2I5 559 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 CDH18Q13634 790 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 HSP90B2PQ58FF3 399 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 RNF219Q5W0B1 726 aaPredicted RBP22.98■■□□□ 1.27
IRF3-201ENST00000309877 TMEM184AQ6ZMB5 413 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 ZNF783Q6ZMS7 281 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 OR52K2Q8NGK3 314 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 TTC25Q96NG3 672 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 XAB2Q9HCS7 855 aaKnown RBP22.98■■□□□ 1.27
IRF3-201ENST00000309877 ATP13A1Q9HD20 1204 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 GOLGA6AQ9NYA3 693 aa22.98■■□□□ 1.27
IRF3-201ENST00000309877 E7ESA3 106 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 FSHRP23945 695 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 MTM1Q13496 603 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 MSS51Q4VC12 460 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 DNAJC21Q5F1R6 531 aaKnown RBP22.97■■□□□ 1.27
IRF3-201ENST00000309877 MPP7Q5T2T1 576 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 CXorf57Q6NSI4 855 aaKnown RBP22.97■■□□□ 1.27
IRF3-201ENST00000309877 OTOP3Q7RTS5 596 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.97■■□□□ 1.27
IRF3-201ENST00000309877 PYROXD1Q8WU10 500 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 TBC1D14Q9P2M4 693 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 NYNRINQ9P2P1 1898 aaKnown RBP22.97■■□□□ 1.27
IRF3-201ENST00000309877 DOCK6Q96HP0 2047 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 ERI2A8K979 691 aaKnown RBP22.97■■□□□ 1.27
IRF3-201ENST00000309877 AGPSO00116 658 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms