RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 NRLP54845 237 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 ABRQ12979 859 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 KBTBD12Q3ZCT8 623 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 PRAMEF19Q5SWL8 479 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 TTI2Q6NXR4 508 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 NUDT18Q6ZVK8 323 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 PHC3Q8NDX5 983 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 MAFFQ9ULX9 164 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 A0A1W2PPM1 405 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 PQBP1O60828 265 aaKnown RBP12.82□□□□□ -0.36
USP38-201ENST00000307017 GUCY1B2O75343 617 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 CAMTA2O94983 1202 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 KCNH1O95259 989 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 PITRM1Q5JRX3 1037 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 ULK3Q6PHR2 472 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 DEF8Q6ZN54 512 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 WDR60Q8WVS4 1066 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 SIPA1Q96FS4 1042 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 CAMKK2Q96RR4 588 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 TRNAU1APQ9NX07 287 aaKnown RBP12.82□□□□□ -0.36
USP38-201ENST00000307017 DKK3Q9UBP4 350 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 A0A0A6YYK5 440 aaPredicted RBP12.82□□□□□ -0.36
USP38-201ENST00000307017 TIPRLO75663 272 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 EPHA3P29320 983 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 CASP5P51878 434 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 SPESP1Q6UW49 350 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 RALGPS2Q86X27 583 aaPredicted RBP12.82□□□□□ -0.36
USP38-201ENST00000307017 DEFB129Q9H1M3 183 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 PXMP2Q9NR77 195 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 MALT1Q9UDY8 824 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 TELO2Q9Y4R8 837 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 SNCAIPQ9Y6H5 919 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 ADGRL3Q9HAR2 1447 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 CENPXA8MT69 81 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 ANKRD63C9JTQ0 380 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 SPAG6O75602 509 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 CDK16Q00536 496 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 SPIBQ01892 262 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 CBX3Q13185 183 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 TAB1Q15750 504 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 DHRSXQ8N5I4 330 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 STK32AQ8WU08 396 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 PRMT6Q96LA8 375 aaPredicted RBP12.82□□□□□ -0.36
USP38-201ENST00000307017 DNAJC18Q9H819 358 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 RRN3Q9NYV6 651 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 TBKBP1A7MCY6 615 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 TPBGLP0DKB5 382 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 MC1RQ01726 317 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 FOLH1Q04609 750 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 MXD1Q05195 221 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 ZNF438Q7Z4V0 828 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 TRAPPC5Q8IUR0 188 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 OR52K2Q8NGK3 314 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 ERGIC2Q96RQ1 377 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 MLPHQ9BV36 600 aaPredicted RBP12.82□□□□□ -0.36
USP38-201ENST00000307017 TM6SF2Q9BZW4 377 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 PNPOQ9NVS9 261 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 A0A0B4J269 797 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 H0Y858 1186 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 YBX3P16989 372 aaKnown RBP eCLIP12.82□□□□□ -0.364e-7■■■■■ 27.3
USP38-201ENST00000307017 STARP49675 285 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 FCHO2Q0JRZ9 810 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 PRR5LQ6MZQ0 368 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 FAM171BQ6P995 826 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 MPZL3Q6UWV2 235 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 C10orf107Q8IVU9 208 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 SLC4A11Q8NBS3 891 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 APOPT1Q96IL0 206 aa12.82□□□□□ -0.36
USP38-201ENST00000307017 LACTBL1A8MY62 500 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 PAPSS1O43252 624 aaPredicted RBP12.81□□□□□ -0.36
USP38-201ENST00000307017 SGTAO43765 313 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 CENPIQ92674 756 aaPredicted RBP12.81□□□□□ -0.36
USP38-201ENST00000307017 VPS35Q96QK1 796 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 BDH2Q9BUT1 245 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 TRBV23OR9-2A0A075B6M9 112 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 E5RJQ4 531 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 TOR1BO14657 336 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 AP2S1P53680 142 aaPredicted RBP12.81□□□□□ -0.36
USP38-201ENST00000307017 USP46P62068 366 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 PFKPQ01813 784 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 MTAPQ13126 283 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 OGFOD2Q6N063 350 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 B3GNT6Q6ZMB0 384 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 GK5Q6ZS86 529 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 FAM124AQ86V42 546 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 SLC2A14Q8TDB8 520 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 ACTRT1Q8TDG2 376 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 KCTD4Q8WVF5 259 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 ZNF184Q99676 751 aaPredicted RBP12.81□□□□□ -0.36
USP38-201ENST00000307017 CHIAQ9BZP6 476 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 RMI1Q9H9A7 625 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 IKZF3Q9UKT9 509 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 TM9SF1O15321 606 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 CCDC166P0CW27 439 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 CD151P48509 253 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 CHN2P52757 468 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 FNDC3BQ53EP0 1204 aaKnown RBP12.81□□□□□ -0.36
USP38-201ENST00000307017 ZDHHC13Q8IUH4 622 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 SP8Q8IXZ3 490 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 MCOLN2Q8IZK6 566 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms