RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 FBXW8Q8N3Y1 598 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 TPD52L3Q96J77 140 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 ZDHHC15Q96MV8 337 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 INVSQ9Y283 1065 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 SNX8Q9Y5X2 465 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 RGSL1A5PLK6 1076 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 TPP1O14773 563 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 VAV1P15498 845 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 PTPN3P26045 913 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 RCVRNP35243 200 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 SLC44A2Q8IWA5 706 aaPredicted RBP7.76□□□□□ -1.17
SF3B3-201ENST00000302516 MCOLN3Q8TDD5 553 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 PYDC1Q8WXC3 89 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 ACSF2Q96CM8 615 aaPredicted RBP7.76□□□□□ -1.17
SF3B3-201ENST00000302516 FHDC1Q9C0D6 1143 aaPredicted RBP7.76□□□□□ -1.17
SF3B3-201ENST00000302516 ROGDIQ9GZN7 287 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 RAPGEFL1Q9UHV5 662 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 GNPTGQ9UJJ9 305 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 GSAPA4D1B5 854 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 LRRC10BA6NIK2 292 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 H3BN98 237 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 ZW10O43264 779 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 IRF1P10914 325 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 OTUD3Q5T2D3 398 aaPredicted RBP7.76□□□□□ -1.17
SF3B3-201ENST00000302516 MARC1Q5VT66 337 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 TXNDC11Q6PKC3 985 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 SYTL1Q8IYJ3 562 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 EMC1Q8N766 993 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 ATL1Q8WXF7 558 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 NELL1Q92832 810 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 ADI1Q9BV57 179 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 MROH8Q9H579 483 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 A0A0A0MRY4 1105 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 PLK4O00444 970 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 PWP1Q13610 501 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 SLC15A2Q16348 729 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 ACOT1Q86TX2 421 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 AGAP11Q8TF27 550 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 SPATA13Q96N96 652 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 YIPF2Q9BWQ6 316 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 SH3GLB1Q9Y371 365 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 TECPR2O15040 1411 aa7.76□□□□□ -1.17
SF3B3-201ENST00000302516 TRIM38O00635 465 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 RGL2O15211 777 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 HMBSP08397 361 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 LTA4HP09960 611 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 OR56A5P0C7T3 313 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 LBPP18428 481 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 MRPS22P82650 360 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 RIPPLY1Q0D2K3 151 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 NTRK3Q16288 839 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 FAM180AQ6UWF9 173 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 ZNF410Q86VK4 478 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 GPSM1Q86YR5 675 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 NKAPQ8N5F7 415 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 NARS2Q96I59 477 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 ASB7Q9H672 318 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 ANGPT4Q9Y264 503 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 OPLAHO14841 1288 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 CPSF4O95639 269 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 SNRPB2P08579 225 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 PAX3P23760 479 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 GTF2E2P29084 291 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 S100A3P33764 101 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 CCT3P49368 545 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 ALDH7A1P49419 539 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 IFI35P80217 286 aaPredicted RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 DPYSL3Q14195 570 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 NFIXQ14938 502 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 EZH2Q15910 746 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 FBXO47Q5MNV8 452 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 BNIPLQ7Z465 357 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 C11orf96Q7Z7L8 435 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 TXNRD3Q86VQ6 643 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 TCF12Q99081 682 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 KLHL1Q9NR64 748 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 PPP2R3BQ9Y5P8 575 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 TEX28O15482 410 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 SGTAO43765 313 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 S100A1P23297 94 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 ITGADQ13349 1161 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 ZPBP2Q6X784 338 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 EIF3MQ7L2H7 374 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 METTL3Q86U44 580 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 SLC5A5Q92911 643 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 MED8Q96G25 268 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 TEKT5Q96M29 485 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 ACOX2Q99424 681 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 CDHR5Q9HBB8 845 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 GGA3Q9NZ52 723 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 COMMD9Q9P000 198 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 DNAJC5BQ9UF47 199 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 SNX6Q9UNH7 406 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 ERGIC3Q9Y282 383 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 SYNCRIPO60506 623 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 PPIBP23284 216 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 LIPMQ5VYY2 423 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 MFSD5Q6N075 450 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 PIWIL4Q7Z3Z4 852 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 C11orf74Q86VG3 221 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms